Experiment: succinate (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS17315 and QEN71_RS17320 are separated by 223 nucleotides QEN71_RS17320 and QEN71_RS17325 are separated by 38 nucleotides
QEN71_RS17315: QEN71_RS17315 - polyhydroxyalkanoate depolymerase, at 3,841,988 to 3,843,370
_RS17315
QEN71_RS17320: QEN71_RS17320 - glutathione S-transferase family protein, at 3,843,594 to 3,844,244
_RS17320
QEN71_RS17325: QEN71_RS17325 - methyl-accepting chemotaxis protein, at 3,844,283 to 3,846,253
_RS17325
Position (kb)
3843
3844
3845 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3842.966 kb on - strand, within QEN71_RS17315 at 3842.967 kb on + strand, within QEN71_RS17315 at 3842.967 kb on + strand, within QEN71_RS17315 at 3842.967 kb on + strand, within QEN71_RS17315 at 3842.967 kb on + strand, within QEN71_RS17315 at 3842.967 kb on + strand, within QEN71_RS17315 at 3842.967 kb on + strand, within QEN71_RS17315 at 3842.968 kb on - strand, within QEN71_RS17315 at 3842.968 kb on - strand, within QEN71_RS17315 at 3842.968 kb on - strand, within QEN71_RS17315 at 3842.968 kb on - strand, within QEN71_RS17315 at 3842.968 kb on - strand, within QEN71_RS17315 at 3842.968 kb on - strand, within QEN71_RS17315 at 3842.968 kb on - strand, within QEN71_RS17315 at 3842.968 kb on - strand, within QEN71_RS17315 at 3843.264 kb on + strand at 3843.264 kb on + strand at 3843.265 kb on - strand at 3843.401 kb on + strand at 3843.402 kb on - strand at 3843.415 kb on + strand at 3843.416 kb on - strand at 3843.416 kb on - strand at 3843.416 kb on - strand at 3843.517 kb on + strand at 3843.618 kb on - strand at 3843.627 kb on + strand at 3843.627 kb on + strand at 3843.628 kb on - strand at 3843.628 kb on - strand at 3843.628 kb on - strand at 3843.628 kb on - strand at 3843.628 kb on - strand at 3843.751 kb on + strand, within QEN71_RS17320 at 3843.751 kb on + strand, within QEN71_RS17320 at 3843.752 kb on - strand, within QEN71_RS17320 at 3843.752 kb on - strand, within QEN71_RS17320 at 3843.780 kb on - strand, within QEN71_RS17320 at 3843.813 kb on + strand, within QEN71_RS17320 at 3843.813 kb on + strand, within QEN71_RS17320 at 3843.970 kb on + strand, within QEN71_RS17320 at 3843.970 kb on + strand, within QEN71_RS17320 at 3843.970 kb on + strand, within QEN71_RS17320 at 3843.971 kb on - strand, within QEN71_RS17320 at 3844.001 kb on + strand, within QEN71_RS17320 at 3844.002 kb on - strand, within QEN71_RS17320 at 3844.002 kb on - strand, within QEN71_RS17320 at 3844.035 kb on + strand, within QEN71_RS17320 at 3844.035 kb on + strand, within QEN71_RS17320 at 3844.047 kb on + strand, within QEN71_RS17320 at 3844.048 kb on - strand, within QEN71_RS17320 at 3844.048 kb on - strand, within QEN71_RS17320 at 3844.083 kb on + strand, within QEN71_RS17320 at 3844.083 kb on + strand, within QEN71_RS17320 at 3844.083 kb on + strand, within QEN71_RS17320 at 3844.083 kb on + strand, within QEN71_RS17320 at 3844.083 kb on + strand, within QEN71_RS17320 at 3844.083 kb on + strand, within QEN71_RS17320 at 3844.083 kb on + strand, within QEN71_RS17320 at 3844.083 kb on + strand, within QEN71_RS17320 at 3844.083 kb on + strand, within QEN71_RS17320 at 3844.084 kb on - strand, within QEN71_RS17320 at 3844.084 kb on - strand, within QEN71_RS17320 at 3844.084 kb on - strand, within QEN71_RS17320 at 3844.084 kb on - strand, within QEN71_RS17320 at 3844.110 kb on - strand, within QEN71_RS17320 at 3844.110 kb on - strand, within QEN71_RS17320 at 3844.110 kb on - strand, within QEN71_RS17320 at 3844.113 kb on + strand, within QEN71_RS17320 at 3844.113 kb on + strand, within QEN71_RS17320 at 3844.113 kb on + strand, within QEN71_RS17320 at 3844.114 kb on - strand, within QEN71_RS17320 at 3844.114 kb on - strand, within QEN71_RS17320 at 3844.146 kb on + strand, within QEN71_RS17320 at 3844.284 kb on + strand at 3844.285 kb on - strand at 3844.285 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction succinate (C) remove 3,842,966 - QEN71_RS17315 0.71 +0.4 3,842,967 + QEN71_RS17315 0.71 -0.7 3,842,967 + QEN71_RS17315 0.71 -0.2 3,842,967 + QEN71_RS17315 0.71 -1.9 3,842,967 + QEN71_RS17315 0.71 -0.6 3,842,967 + QEN71_RS17315 0.71 +0.9 3,842,967 + QEN71_RS17315 0.71 -0.1 3,842,968 - QEN71_RS17315 0.71 +0.0 3,842,968 - QEN71_RS17315 0.71 -0.6 3,842,968 - QEN71_RS17315 0.71 -0.0 3,842,968 - QEN71_RS17315 0.71 +0.1 3,842,968 - QEN71_RS17315 0.71 -0.7 3,842,968 - QEN71_RS17315 0.71 +1.0 3,842,968 - QEN71_RS17315 0.71 -0.7 3,842,968 - QEN71_RS17315 0.71 +0.1 3,843,264 + +0.8 3,843,264 + -0.1 3,843,265 - +2.5 3,843,401 + -0.8 3,843,402 - -1.3 3,843,415 + +0.9 3,843,416 - +0.9 3,843,416 - -0.1 3,843,416 - +0.5 3,843,517 + +0.2 3,843,618 - +0.3 3,843,627 + -0.4 3,843,627 + -0.2 3,843,628 - +0.1 3,843,628 - -0.6 3,843,628 - -0.5 3,843,628 - -0.4 3,843,628 - +0.9 3,843,751 + QEN71_RS17320 0.24 -0.7 3,843,751 + QEN71_RS17320 0.24 -1.6 3,843,752 - QEN71_RS17320 0.24 -0.7 3,843,752 - QEN71_RS17320 0.24 -1.6 3,843,780 - QEN71_RS17320 0.29 +0.9 3,843,813 + QEN71_RS17320 0.34 -0.7 3,843,813 + QEN71_RS17320 0.34 -0.6 3,843,970 + QEN71_RS17320 0.58 -0.7 3,843,970 + QEN71_RS17320 0.58 +0.2 3,843,970 + QEN71_RS17320 0.58 -0.2 3,843,971 - QEN71_RS17320 0.58 +0.5 3,844,001 + QEN71_RS17320 0.63 -0.5 3,844,002 - QEN71_RS17320 0.63 -0.5 3,844,002 - QEN71_RS17320 0.63 +0.3 3,844,035 + QEN71_RS17320 0.68 +0.1 3,844,035 + QEN71_RS17320 0.68 +0.6 3,844,047 + QEN71_RS17320 0.70 -1.5 3,844,048 - QEN71_RS17320 0.70 +0.6 3,844,048 - QEN71_RS17320 0.70 -0.1 3,844,083 + QEN71_RS17320 0.75 -1.2 3,844,083 + QEN71_RS17320 0.75 -0.2 3,844,083 + QEN71_RS17320 0.75 -0.1 3,844,083 + QEN71_RS17320 0.75 -1.0 3,844,083 + QEN71_RS17320 0.75 +0.1 3,844,083 + QEN71_RS17320 0.75 -1.6 3,844,083 + QEN71_RS17320 0.75 -0.9 3,844,083 + QEN71_RS17320 0.75 -0.1 3,844,083 + QEN71_RS17320 0.75 -0.2 3,844,084 - QEN71_RS17320 0.75 -0.1 3,844,084 - QEN71_RS17320 0.75 +0.5 3,844,084 - QEN71_RS17320 0.75 +1.1 3,844,084 - QEN71_RS17320 0.75 +1.1 3,844,110 - QEN71_RS17320 0.79 -0.1 3,844,110 - QEN71_RS17320 0.79 -0.4 3,844,110 - QEN71_RS17320 0.79 +0.2 3,844,113 + QEN71_RS17320 0.80 -1.3 3,844,113 + QEN71_RS17320 0.80 -0.3 3,844,113 + QEN71_RS17320 0.80 +1.3 3,844,114 - QEN71_RS17320 0.80 +0.9 3,844,114 - QEN71_RS17320 0.80 +0.6 3,844,146 + QEN71_RS17320 0.85 +0.1 3,844,284 + -0.7 3,844,285 - -0.0 3,844,285 - +0.5
Or see this region's nucleotide sequence