Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03775

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
4,218,911	+		MIT1002_03773	0.71	-0.4
4,218,997	+		MIT1002_03773	0.84	-1.9
4,219,061	+				+1.3
4,219,089	+				-1.1
4,219,089	+				-0.8
4,219,089	+				+0.9
4,219,097	-				+2.1
4,219,097	-				-0.5
4,219,120	+				-1.9
4,219,122	+				+0.3
4,219,135	+				-1.3
4,219,143	-				+1.9
4,219,143	-				+2.0
4,219,143	-				-0.4
4,219,143	-				+0.0
4,219,173	-		MIT1002_03774	0.12	+1.5
4,219,201	-		MIT1002_03774	0.17	+0.2
4,219,258	+		MIT1002_03774	0.28	+0.1
4,219,303	+		MIT1002_03774	0.36	+0.3
4,219,303	+		MIT1002_03774	0.36	-0.9
4,219,359	-		MIT1002_03774	0.46	-0.3
4,219,368	-		MIT1002_03774	0.47	+0.2
4,219,524	+		MIT1002_03774	0.75	+1.2
4,219,583	+		MIT1002_03774	0.86	+1.3
4,219,620	+				-1.3
4,219,675	-				+0.2
4,219,799	+				-0.5
4,219,799	+				-0.2
4,219,799	+				+0.8
4,219,799	+				-0.2
4,219,799	+				-0.8
4,219,803	-				-0.7
4,219,807	-				-0.4
4,219,807	-				-0.1
4,219,807	-				-0.1
4,219,810	+				+0.2
4,219,815	+				+0.3
4,219,830	+				-0.1
4,219,838	-				-0.2
4,219,874	+				-1.2
4,219,898	+				-0.4
4,219,916	-				+1.2
4,220,065	+		MIT1002_03775	0.16	+1.2
4,220,076	-		MIT1002_03775	0.17	+0.6
4,220,124	+		MIT1002_03775	0.22	-0.2
4,220,124	+		MIT1002_03775	0.22	-1.1
4,220,124	+		MIT1002_03775	0.22	-0.1
4,220,124	+		MIT1002_03775	0.22	-0.4
4,220,132	-		MIT1002_03775	0.23	-1.0
4,220,132	-		MIT1002_03775	0.23	+1.1
4,220,132	-		MIT1002_03775	0.23	-0.4
4,220,145	-		MIT1002_03775	0.24	-0.1
4,220,190	-		MIT1002_03775	0.29	-0.0
4,220,190	-		MIT1002_03775	0.29	+2.4
4,220,203	-		MIT1002_03775	0.30	-1.7
4,220,252	-		MIT1002_03775	0.35	-1.1
4,220,290	+		MIT1002_03775	0.38	+4.2
4,220,290	+		MIT1002_03775	0.38	+1.5
4,220,405	-		MIT1002_03775	0.50	-0.8
4,220,469	-		MIT1002_03775	0.56	+0.7
4,220,537	+		MIT1002_03775	0.63	-1.4
4,220,575	+		MIT1002_03775	0.66	+0.2
4,220,575	+		MIT1002_03775	0.66	+1.3
4,220,575	+		MIT1002_03775	0.66	+0.6
4,220,577	+		MIT1002_03775	0.67	-1.3
4,220,583	-		MIT1002_03775	0.67	+0.5
4,220,583	-		MIT1002_03775	0.67	+3.5
4,220,583	-		MIT1002_03775	0.67	+0.7
4,220,583	-		MIT1002_03775	0.67	+2.3
4,220,632	+		MIT1002_03775	0.72	+0.7
4,220,707	-		MIT1002_03775	0.79	+0.4
4,220,719	+		MIT1002_03775	0.81	-2.5
4,220,719	+		MIT1002_03775	0.81	+0.2
4,220,727	-		MIT1002_03775	0.81	+1.5
4,220,776	-		MIT1002_03775	0.86	-0.4
4,220,878	-				+0.5
4,220,880	-				+0.7
4,220,914	+				+1.1
4,220,919	+				-0.7
4,220,919	+				-0.9
4,220,919	+				+0.1
4,220,972	+				+0.9
4,221,079	-		MIT1002_03776	0.17	-0.3
4,221,231	-		MIT1002_03776	0.32	-0.1
4,221,251	-		MIT1002_03776	0.34	+1.0
4,221,310	+		MIT1002_03776	0.40	-2.6
4,221,330	+		MIT1002_03776	0.42	+0.7
4,221,330	+		MIT1002_03776	0.42	-0.6
4,221,465	+		MIT1002_03776	0.56	+0.5
4,221,473	-		MIT1002_03776	0.56	-0.6
4,221,493	-		MIT1002_03776	0.58	-0.2
4,221,530	+		MIT1002_03776	0.62	+0.1
4,221,530	+		MIT1002_03776	0.62	+0.2
4,221,563	+		MIT1002_03776	0.66	-1.0
4,221,635	+		MIT1002_03776	0.73	-0.7
4,221,652	+		MIT1002_03776	0.75	-0.8
4,221,660	-		MIT1002_03776	0.75	+1.7
4,221,800	-		MIT1002_03776	0.89	+0.3
4,221,801	+		MIT1002_03776	0.90	+0.1
4,221,802	+		MIT1002_03776	0.90	+1.0
4,221,855	+				-1.7
4,221,863	-				+2.2
4,221,863	-				+0.5
4,221,889	+				+1.0
4,221,897	+				-1.4
4,221,909	-				+0.2