Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03709

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
4,143,270	+		MIT1002_03708	0.63	+0.3
4,143,270	+		MIT1002_03708	0.63	-3.2
4,143,270	+		MIT1002_03708	0.63	+1.1
4,143,322	+		MIT1002_03708	0.66	-3.4
4,143,330	+		MIT1002_03708	0.67	-2.4
4,143,370	-		MIT1002_03708	0.69	-0.1
4,143,430	-		MIT1002_03708	0.73	+0.0
4,143,469	+		MIT1002_03708	0.75	-0.7
4,143,489	-		MIT1002_03708	0.76	-2.0
4,143,524	+		MIT1002_03708	0.78	-0.7
4,143,524	+		MIT1002_03708	0.78	-0.9
4,143,524	+		MIT1002_03708	0.78	-2.2
4,143,524	+		MIT1002_03708	0.78	-0.4
4,143,524	+		MIT1002_03708	0.78	-0.1
4,143,524	+		MIT1002_03708	0.78	-2.7
4,143,524	+		MIT1002_03708	0.78	-3.1
4,143,524	+		MIT1002_03708	0.78	-0.3
4,143,532	-		MIT1002_03708	0.79	-2.0
4,143,558	+		MIT1002_03708	0.80	-0.1
4,143,566	-		MIT1002_03708	0.81	-0.4
4,143,568	+		MIT1002_03708	0.81	+0.6
4,143,623	+		MIT1002_03708	0.84	-0.7
4,143,623	+		MIT1002_03708	0.84	-0.9
4,143,631	-		MIT1002_03708	0.85	-1.4
4,143,655	-		MIT1002_03708	0.86	+0.6
4,143,733	+				-0.6
4,143,793	-				-0.7
4,143,872	-				-1.1
4,143,872	-				-1.3
4,143,881	-				-1.1
4,143,885	+				-0.4
4,143,893	-				+0.0
4,143,918	+				-3.2
4,143,926	-				-0.3
4,143,971	+				+0.3
4,143,974	-				-1.2
4,143,990	-				-0.4
4,143,990	-				+1.3
4,144,037	+				-1.8
4,144,044	+				+1.1
4,144,044	+				-1.0
4,144,078	-				+0.3
4,144,124	+				-1.0
4,144,125	+				-2.5
4,144,127	-				-1.6
4,144,179	-				-0.9
4,144,187	-				+0.9
4,144,230	-				-0.9
4,144,230	-				+0.9
4,144,257	+				+1.8
4,144,340	+				-2.5
4,144,374	+				+0.4
4,144,439	+		MIT1002_03709	0.13	+0.1
4,144,441	+		MIT1002_03709	0.13	-1.7
4,144,458	+		MIT1002_03709	0.14	-3.2
4,144,589	-		MIT1002_03709	0.24	-1.6
4,144,620	+		MIT1002_03709	0.26	-2.5
4,144,667	+		MIT1002_03709	0.29	+0.4
4,144,675	-		MIT1002_03709	0.30	-0.7
4,144,720	-		MIT1002_03709	0.33	+0.4
4,144,720	-		MIT1002_03709	0.33	-0.0
4,144,720	-		MIT1002_03709	0.33	+1.2
4,144,720	-		MIT1002_03709	0.33	-0.5
4,144,722	+		MIT1002_03709	0.33	-0.2
4,144,781	+		MIT1002_03709	0.37	+0.6
4,144,815	-		MIT1002_03709	0.40	+1.6
4,144,817	+		MIT1002_03709	0.40	+0.2
4,144,841	+		MIT1002_03709	0.42	-0.4
4,144,842	-		MIT1002_03709	0.42	+0.1
4,144,970	+		MIT1002_03709	0.51	-0.2
4,144,983	-		MIT1002_03709	0.52	-0.5
4,144,998	+		MIT1002_03709	0.53	-0.1
4,144,999	-		MIT1002_03709	0.53	-1.7
4,145,014	+		MIT1002_03709	0.54	-1.4
4,145,014	+		MIT1002_03709	0.54	-0.4
4,145,014	+		MIT1002_03709	0.54	-0.8
4,145,014	+		MIT1002_03709	0.54	-0.4
4,145,022	-		MIT1002_03709	0.55	-0.7
4,145,022	-		MIT1002_03709	0.55	-1.0
4,145,107	+		MIT1002_03709	0.61	-0.6
4,145,124	+		MIT1002_03709	0.62	+0.0
4,145,171	-		MIT1002_03709	0.65	+0.0
4,145,246	+		MIT1002_03709	0.71	-3.1
4,145,270	-		MIT1002_03709	0.72	-0.9
4,145,272	+		MIT1002_03709	0.72	-0.5
4,145,348	-		MIT1002_03709	0.78	-0.1
4,145,350	+		MIT1002_03709	0.78	-0.3
4,145,408	+		MIT1002_03709	0.82	-2.8
4,145,420	-		MIT1002_03709	0.83	-0.3
4,145,430	-		MIT1002_03709	0.84	-0.2
4,145,441	-		MIT1002_03709	0.85	+0.4
4,145,451	-		MIT1002_03709	0.85	+0.1
4,145,527	+				+0.3
4,145,527	+				+0.5
4,145,535	-				+1.4
4,145,545	-				+0.1
4,145,558	+				+0.1
4,145,558	+				+1.0
4,145,566	-				+0.1
4,145,590	+				+0.2
4,145,597	+				+0.1
4,145,611	+				-1.0
4,145,619	-				+0.8
4,145,619	-				+0.1
4,145,619	-				-0.3
4,145,619	-				-0.6
4,145,642	+				+1.1
4,145,725	-				-1.0
4,145,740	+				-2.1
4,145,742	+				-0.6
4,145,748	-				+1.2
4,145,750	+				+0.6
4,145,772	-				-1.0
4,145,825	-				+0.5
4,145,873	-		MIT1002_03710	0.12	-0.3
4,145,873	-		MIT1002_03710	0.12	+0.5
4,145,921	-		MIT1002_03710	0.18	+0.5
4,145,957	-		MIT1002_03710	0.23	-0.1
4,145,959	-		MIT1002_03710	0.23	+0.6
4,145,976	-		MIT1002_03710	0.25	-0.0
4,145,988	-		MIT1002_03710	0.26	+0.2
4,146,096	-		MIT1002_03710	0.39	+0.8
4,146,155	-		MIT1002_03710	0.46	+0.9
4,146,181	+		MIT1002_03710	0.49	-0.7
4,146,192	+		MIT1002_03710	0.51	-3.5
4,146,200	+		MIT1002_03710	0.52	-0.3
4,146,237	-		MIT1002_03710	0.56	+0.4
4,146,308	-		MIT1002_03710	0.65	+2.6
4,146,345	-		MIT1002_03710	0.69	-0.5
4,146,345	-		MIT1002_03710	0.69	-1.2
4,146,384	-		MIT1002_03710	0.74	-1.2
4,146,512	-		MIT1002_03710	0.89	+0.5
4,146,514	+		MIT1002_03710	0.89	-1.3
4,146,573	+				-0.8
4,146,618	+				-0.5
4,146,618	+				-0.4
4,146,618	+				+0.1