Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03523

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
3,938,860	+				+0.8
3,938,873	+				-0.9
3,938,906	+				+0.1
3,938,950	-		MIT1002_03522	0.14	-0.7
3,938,962	+		MIT1002_03522	0.15	+1.4
3,938,995	+		MIT1002_03522	0.19	+0.8
3,939,021	+		MIT1002_03522	0.22	+1.6
3,939,021	+		MIT1002_03522	0.22	-0.1
3,939,029	-		MIT1002_03522	0.23	+0.8
3,939,042	+		MIT1002_03522	0.25	-0.1
3,939,085	-		MIT1002_03522	0.30	+1.5
3,939,107	+		MIT1002_03522	0.33	+0.2
3,939,108	-		MIT1002_03522	0.33	+0.4
3,939,120	-		MIT1002_03522	0.34	+0.5
3,939,291	+		MIT1002_03522	0.54	+0.5
3,939,330	-		MIT1002_03522	0.59	+0.2
3,939,330	-		MIT1002_03522	0.59	+0.5
3,939,451	+		MIT1002_03522	0.73	+0.1
3,939,459	-		MIT1002_03522	0.74	+0.8
3,939,461	+		MIT1002_03522	0.74	-0.1
3,939,461	+		MIT1002_03522	0.74	-1.0
3,939,461	+		MIT1002_03522	0.74	+1.3
3,939,461	+		MIT1002_03522	0.74	-1.8
3,939,461	+		MIT1002_03522	0.74	-0.1
3,939,461	+		MIT1002_03522	0.74	-0.1
3,939,469	-		MIT1002_03522	0.75	-0.2
3,939,469	-		MIT1002_03522	0.75	-2.4
3,939,469	-		MIT1002_03522	0.75	+0.0
3,939,469	-		MIT1002_03522	0.75	-1.8
3,939,469	-		MIT1002_03522	0.75	+1.3
3,939,469	-		MIT1002_03522	0.75	+0.7
3,939,469	-		MIT1002_03522	0.75	+0.3
3,939,469	-		MIT1002_03522	0.75	-0.1
3,939,469	-		MIT1002_03522	0.75	-2.4
3,939,469	-		MIT1002_03522	0.75	-2.4
3,939,469	-		MIT1002_03522	0.75	-0.9
3,939,469	-		MIT1002_03522	0.75	+0.3
3,939,469	-		MIT1002_03522	0.75	+0.1
3,939,469	-		MIT1002_03522	0.75	-0.0
3,939,530	+		MIT1002_03522	0.83	+1.6
3,939,530	+		MIT1002_03522	0.83	-0.7
3,939,535	+		MIT1002_03522	0.83	-0.4
3,939,538	-		MIT1002_03522	0.84	+0.6
3,939,538	-		MIT1002_03522	0.84	+0.1
3,939,538	-		MIT1002_03522	0.84	+0.8
3,939,540	+		MIT1002_03522	0.84	+1.6
3,939,548	-		MIT1002_03522	0.85	+0.5
3,939,600	+				+0.7
3,939,600	-				+0.8
3,939,681	+				+1.0
3,939,683	+				-0.3
3,939,702	+				-0.5
3,939,982	-		MIT1002_03523	0.17	+0.0
3,940,035	+		MIT1002_03523	0.24	+1.9
3,940,043	-		MIT1002_03523	0.25	+3.3
3,940,045	+		MIT1002_03523	0.25	-0.2
3,940,051	-		MIT1002_03523	0.26	+1.1
3,940,051	-		MIT1002_03523	0.26	+0.3
3,940,051	-		MIT1002_03523	0.26	+0.3
3,940,105	+		MIT1002_03523	0.32	+0.9
3,940,110	+		MIT1002_03523	0.33	-2.0
3,940,110	+		MIT1002_03523	0.33	+0.2
3,940,110	+		MIT1002_03523	0.33	-0.3
3,940,113	-		MIT1002_03523	0.33	+1.4
3,940,118	-		MIT1002_03523	0.34	-0.9
3,940,118	-		MIT1002_03523	0.34	+0.6
3,940,118	-		MIT1002_03523	0.34	-1.0
3,940,174	-		MIT1002_03523	0.40	-3.2
3,940,187	-		MIT1002_03523	0.42	-1.4
3,940,209	-		MIT1002_03523	0.44	-0.4
3,940,233	+		MIT1002_03523	0.47	+1.5
3,940,233	+		MIT1002_03523	0.47	+1.6
3,940,330	+		MIT1002_03523	0.59	+1.3
3,940,408	+		MIT1002_03523	0.68	+0.7
3,940,408	+		MIT1002_03523	0.68	-0.9
3,940,416	-		MIT1002_03523	0.69	+0.5
3,940,439	-		MIT1002_03523	0.72	+0.2
3,940,465	+		MIT1002_03523	0.75	-1.0
3,940,511	-		MIT1002_03523	0.80	+1.6
3,940,644	+				-0.4
3,940,652	-				+2.7
3,940,724	+				+0.1
3,940,724	+				+1.4
3,940,739	-				+1.0
3,940,739	-				+0.5
3,940,752	+				+0.6
3,940,752	+				+0.4
3,940,770	-				-1.8
3,940,770	-				+0.3
3,940,822	+				+1.2
3,940,828	-				-0.5
3,940,864	-				+0.6
3,940,935	-				+0.2
3,941,039	-				-3.7
3,941,069	-				+0.7
3,941,166	-		MIT1002_03524	0.13	+0.6
3,941,188	+		MIT1002_03524	0.14	+1.3
3,941,189	-		MIT1002_03524	0.14	+0.5
3,941,211	-		MIT1002_03524	0.14	+1.2
3,941,211	-		MIT1002_03524	0.14	-0.4
3,941,241	-		MIT1002_03524	0.15	+0.0
3,941,258	+		MIT1002_03524	0.16	+0.1
3,941,278	+		MIT1002_03524	0.17	+0.8
3,941,319	+		MIT1002_03524	0.18	+2.3
3,941,319	+		MIT1002_03524	0.18	-0.5
3,941,332	-		MIT1002_03524	0.18	+1.8
3,941,335	+		MIT1002_03524	0.18	+0.8
3,941,506	-		MIT1002_03524	0.24	+0.8
3,941,529	-		MIT1002_03524	0.25	+1.0
3,941,529	-		MIT1002_03524	0.25	+0.6
3,941,535	+		MIT1002_03524	0.25	+1.0
3,941,574	-		MIT1002_03524	0.26	+0.0
3,941,574	-		MIT1002_03524	0.26	-0.2