Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03515

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
3,927,343	+				+0.1
3,927,403	+				-0.4
3,927,406	-				-1.6
3,927,440	-				+0.3
3,927,485	-		MIT1002_03514	0.14	-0.8
3,927,512	-		MIT1002_03514	0.16	-0.9
3,927,572	-		MIT1002_03514	0.23	-0.1
3,927,585	-		MIT1002_03514	0.24	-0.9
3,927,585	-		MIT1002_03514	0.24	+0.6
3,927,598	-		MIT1002_03514	0.25	+0.5
3,927,642	-		MIT1002_03514	0.30	-0.0
3,927,644	+		MIT1002_03514	0.30	-0.3
3,927,644	+		MIT1002_03514	0.30	+0.3
3,927,644	+		MIT1002_03514	0.30	+0.9
3,927,652	-		MIT1002_03514	0.31	+0.8
3,927,652	-		MIT1002_03514	0.31	+0.7
3,927,652	-		MIT1002_03514	0.31	-1.7
3,927,652	-		MIT1002_03514	0.31	+0.9
3,927,652	-		MIT1002_03514	0.31	+1.1
3,927,652	-		MIT1002_03514	0.31	+1.0
3,927,691	-		MIT1002_03514	0.35	-0.1
3,927,700	+		MIT1002_03514	0.35	-0.3
3,927,708	-		MIT1002_03514	0.36	+1.4
3,927,759	+		MIT1002_03514	0.41	+0.5
3,927,809	+		MIT1002_03514	0.46	+0.3
3,927,829	+		MIT1002_03514	0.48	+0.2
3,927,837	-		MIT1002_03514	0.49	-0.4
3,928,008	-		MIT1002_03514	0.67	+1.6
3,928,102	+		MIT1002_03514	0.76	+0.2
3,928,110	-		MIT1002_03514	0.77	-2.6
3,928,168	+		MIT1002_03514	0.83	+2.3
3,928,169	+		MIT1002_03514	0.83	-0.9
3,928,169	+		MIT1002_03514	0.83	+0.4
3,928,177	-		MIT1002_03514	0.84	-0.8
3,928,206	+		MIT1002_03514	0.87	+0.0
3,928,290	+				-0.2
3,928,350	-				+5.3
3,928,419	-		MIT1002_03515	0.19	+10.1
3,928,502	+		MIT1002_03515	0.32	+8.4
3,928,568	+		MIT1002_03515	0.42	+8.7
3,928,667	-		MIT1002_03515	0.57	+9.4
3,928,819	-		MIT1002_03515	0.81	+9.0
3,928,830	+		MIT1002_03515	0.82	+8.5
3,928,830	+		MIT1002_03515	0.82	+9.2
3,928,830	+		MIT1002_03515	0.82	+8.4
3,928,864	-		MIT1002_03515	0.88	+8.2
3,928,934	+				+5.9
3,929,014	+				-0.9
3,929,030	-				-5.2
3,929,093	+				-5.8
3,929,197	+		MIT1002_03516	0.12	-1.1
3,929,246	+		MIT1002_03516	0.15	-4.5
3,929,253	+		MIT1002_03516	0.15	-4.3
3,929,283	+		MIT1002_03516	0.17	-7.1
3,929,291	-		MIT1002_03516	0.17	-5.1
3,929,324	+		MIT1002_03516	0.19	-6.2
3,929,420	+		MIT1002_03516	0.24	-6.2
3,929,435	-		MIT1002_03516	0.24	-4.0
3,929,435	-		MIT1002_03516	0.24	-4.4
3,929,494	-		MIT1002_03516	0.27	-2.5
3,929,496	+		MIT1002_03516	0.27	-5.7
3,929,535	-		MIT1002_03516	0.29	-3.3
3,929,549	+		MIT1002_03516	0.30	-1.9
3,929,556	+		MIT1002_03516	0.31	-5.0
3,929,569	-		MIT1002_03516	0.31	-3.6
3,929,607	+		MIT1002_03516	0.33	-2.4
3,929,615	-		MIT1002_03516	0.34	-3.4
3,929,615	-		MIT1002_03516	0.34	-4.5
3,929,711	+		MIT1002_03516	0.39	-1.8
3,929,746	+		MIT1002_03516	0.40	-4.2
3,929,779	+		MIT1002_03516	0.42	-1.8