Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03470

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
3,878,436	-				-0.5
3,878,471	+				+1.1
3,878,554	-				-0.2
3,878,606	+				+0.4
3,878,703	-		MIT1002_03469	0.24	-0.7
3,878,706	-		MIT1002_03469	0.24	+0.6
3,878,755	-		MIT1002_03469	0.31	+0.8
3,878,769	+		MIT1002_03469	0.33	-0.1
3,878,769	+		MIT1002_03469	0.33	+0.4
3,878,777	-		MIT1002_03469	0.35	+0.5
3,878,795	+		MIT1002_03469	0.37	-0.1
3,878,803	-		MIT1002_03469	0.38	+0.4
3,878,828	-		MIT1002_03469	0.42	-0.7
3,878,911	+		MIT1002_03469	0.54	-0.5
3,878,978	+		MIT1002_03469	0.64	+0.3
3,879,030	-		MIT1002_03469	0.72	+0.5
3,879,062	-		MIT1002_03469	0.77	+1.2
3,879,095	-		MIT1002_03469	0.82	-0.2
3,879,164	-				-0.1
3,879,166	-				+0.6
3,879,169	+				-1.0
3,879,202	+				+0.6
3,879,203	+				+0.5
3,879,211	-				-2.8
3,879,213	+				+0.9
3,879,294	+				-0.8
3,879,387	-		MIT1002_03470	0.12	+0.7
3,879,406	-		MIT1002_03470	0.15	+0.7
3,879,408	+		MIT1002_03470	0.15	+0.1
3,879,440	+		MIT1002_03470	0.20	+0.9
3,879,483	+		MIT1002_03470	0.26	+0.4
3,879,492	+		MIT1002_03470	0.28	+0.7
3,879,492	-		MIT1002_03470	0.28	-0.1
3,879,550	+		MIT1002_03470	0.36	+0.2
3,879,636	+		MIT1002_03470	0.49	+0.8
3,879,690	-		MIT1002_03470	0.57	+1.2
3,879,718	+		MIT1002_03470	0.61	+3.3
3,879,736	+		MIT1002_03470	0.64	-0.1
3,879,761	-		MIT1002_03470	0.68	+0.0
3,879,887	+		MIT1002_03470	0.86	+0.4
3,879,894	-		MIT1002_03470	0.88	+1.4
3,879,948	+				+0.2
3,879,948	-				-0.7
3,879,949	-				-1.0
3,880,020	-				+1.1
3,880,100	+				-0.1
3,880,305	-		MIT1002_03471	0.27	-1.2
3,880,376	+		MIT1002_03471	0.34	+0.3
3,880,402	-		MIT1002_03471	0.37	+0.1
3,880,409	+		MIT1002_03471	0.38	+0.3
3,880,419	-		MIT1002_03471	0.39	+1.3
3,880,419	-		MIT1002_03471	0.39	+0.4
3,880,459	+		MIT1002_03471	0.44	+0.8
3,880,459	+		MIT1002_03471	0.44	-0.0
3,880,534	+		MIT1002_03471	0.52	+1.3
3,880,539	+		MIT1002_03471	0.52	+0.1
3,880,573	+		MIT1002_03471	0.56	-1.6
3,880,576	-		MIT1002_03471	0.57	+0.0
3,880,613	+		MIT1002_03471	0.61	-2.9
3,880,642	+		MIT1002_03471	0.64	-1.8
3,880,702	+		MIT1002_03471	0.70	-0.1
3,880,724	+		MIT1002_03471	0.73	+0.5
3,880,747	+		MIT1002_03471	0.75	-2.9
3,880,747	+		MIT1002_03471	0.75	+0.8
3,880,755	-		MIT1002_03471	0.76	-1.2
3,880,776	+		MIT1002_03471	0.79	-0.4
3,880,784	+		MIT1002_03471	0.79	+0.9
3,880,784	-		MIT1002_03471	0.79	-1.5
3,880,799	-		MIT1002_03471	0.81	+0.7
3,880,861	+		MIT1002_03471	0.88	-0.7
3,880,861	+		MIT1002_03471	0.88	-0.7
3,880,861	+		MIT1002_03471	0.88	-1.1
3,880,861	+		MIT1002_03471	0.88	-0.9
3,880,861	+		MIT1002_03471	0.88	+0.1
3,880,861	+		MIT1002_03471	0.88	+1.6
3,880,869	-		MIT1002_03471	0.89	-0.1
3,880,869	-		MIT1002_03471	0.89	+1.3
3,880,869	-		MIT1002_03471	0.89	+0.6