Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03335

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
3,724,707	+		MIT1002_03333	0.29	+2.4
3,724,712	-		MIT1002_03333	0.30	-1.1
3,724,714	+		MIT1002_03333	0.30	-2.3
3,724,749	+		MIT1002_03333	0.35	+0.7
3,724,749	+		MIT1002_03333	0.35	-2.0
3,724,757	-		MIT1002_03333	0.36	+0.7
3,724,757	-		MIT1002_03333	0.36	-2.4
3,724,783	+		MIT1002_03333	0.39	-0.3
3,724,784	+		MIT1002_03333	0.39	+0.5
3,724,792	-		MIT1002_03333	0.40	+0.1
3,724,857	+		MIT1002_03333	0.49	-2.0
3,724,943	-		MIT1002_03333	0.60	+0.0
3,724,971	+		MIT1002_03333	0.64	+0.4
3,724,977	-		MIT1002_03333	0.65	+0.8
3,725,003	-		MIT1002_03333	0.68	+0.9
3,725,043	+		MIT1002_03333	0.73	+0.2
3,725,051	-		MIT1002_03333	0.74	-0.7
3,725,051	-		MIT1002_03333	0.74	+0.9
3,725,053	+		MIT1002_03333	0.75	-0.7
3,725,074	+		MIT1002_03333	0.77	-2.2
3,725,122	+		MIT1002_03333	0.84	+0.1
3,725,179	+				-0.2
3,725,240	+				+1.4
3,725,279	+				+0.9
3,725,310	-		MIT1002_03334	0.12	+0.5
3,725,319	-		MIT1002_03334	0.14	+0.7
3,725,338	-		MIT1002_03334	0.18	-0.6
3,725,370	+		MIT1002_03334	0.25	-1.5
3,725,494	+		MIT1002_03334	0.53	+0.8
3,725,503	+		MIT1002_03334	0.55	+0.8
3,725,508	+		MIT1002_03334	0.56	+0.2
3,725,533	-		MIT1002_03334	0.61	-0.2
3,725,545	-		MIT1002_03334	0.64	-0.8
3,725,623	+		MIT1002_03334	0.81	-0.1
3,725,689	-				+0.7
3,725,729	+				-1.0
3,725,739	-				-1.1
3,725,830	-		MIT1002_03335	0.32	-0.5
3,725,843	+		MIT1002_03335	0.36	-1.2
3,725,925	+		MIT1002_03335	0.56	-1.0
3,725,925	+		MIT1002_03335	0.56	+0.9
3,725,933	-		MIT1002_03335	0.59	-0.4
3,725,933	-		MIT1002_03335	0.59	+0.2
3,725,933	-		MIT1002_03335	0.59	-0.4
3,725,933	-		MIT1002_03335	0.59	-0.5
3,725,943	+		MIT1002_03335	0.61	+1.0
3,725,943	+		MIT1002_03335	0.61	-1.8
3,725,943	+		MIT1002_03335	0.61	-0.3
3,725,943	+		MIT1002_03335	0.61	-2.0
3,726,107	-				+0.5
3,726,148	+				-2.0
3,726,197	+				-0.4
3,726,199	-				-0.6
3,726,199	-				-0.2
3,726,205	+				+0.3
3,726,263	+				-0.4
3,726,367	+		MIT1002_03336	0.15	+0.5
3,726,367	+		MIT1002_03336	0.15	+0.6
3,726,549	+		MIT1002_03336	0.28	-2.7
3,726,586	+		MIT1002_03336	0.30	-0.8
3,726,586	+		MIT1002_03336	0.30	+2.3
3,726,586	+		MIT1002_03336	0.30	-2.8
3,726,586	+		MIT1002_03336	0.30	+0.8
3,726,594	-		MIT1002_03336	0.31	+0.7
3,726,594	-		MIT1002_03336	0.31	+0.4
3,726,594	-		MIT1002_03336	0.31	-0.7
3,726,594	-		MIT1002_03336	0.31	-0.3
3,726,637	+		MIT1002_03336	0.34	+0.3
3,726,765	-		MIT1002_03336	0.43	-0.4
3,726,795	+		MIT1002_03336	0.45	-1.2
3,726,852	+		MIT1002_03336	0.49	+1.0
3,726,880	+		MIT1002_03336	0.50	-0.6
3,726,880	+		MIT1002_03336	0.50	-0.6
3,726,958	-		MIT1002_03336	0.56	+0.4
3,726,967	-		MIT1002_03336	0.57	-0.7
3,726,980	-		MIT1002_03336	0.57	-1.4
3,726,990	-		MIT1002_03336	0.58	-1.4
3,727,027	-		MIT1002_03336	0.61	+0.5
3,727,060	+		MIT1002_03336	0.63	-1.9
3,727,095	+		MIT1002_03336	0.65	-1.7