Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03302

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
3,683,359	+		MIT1002_03301	0.34	-1.2
3,683,359	+		MIT1002_03301	0.34	+0.6
3,683,359	+		MIT1002_03301	0.34	+0.2
3,683,367	-		MIT1002_03301	0.35	+1.4
3,683,461	+		MIT1002_03301	0.42	+0.0
3,683,461	+		MIT1002_03301	0.42	+0.8
3,683,469	-		MIT1002_03301	0.42	+0.6
3,683,540	+		MIT1002_03301	0.47	+1.7
3,683,577	-		MIT1002_03301	0.50	-0.5
3,683,579	-		MIT1002_03301	0.50	+1.5
3,683,583	+		MIT1002_03301	0.50	+1.9
3,683,591	-		MIT1002_03301	0.51	+0.5
3,683,591	-		MIT1002_03301	0.51	+0.3
3,683,647	+		MIT1002_03301	0.55	+1.5
3,683,710	+		MIT1002_03301	0.59	-1.9
3,683,730	-		MIT1002_03301	0.61	-0.6
3,683,751	+		MIT1002_03301	0.62	-0.8
3,683,756	+		MIT1002_03301	0.63	-0.7
3,683,761	-		MIT1002_03301	0.63	+1.0
3,683,768	+		MIT1002_03301	0.64	-0.5
3,683,770	+		MIT1002_03301	0.64	+0.8
3,683,800	-		MIT1002_03301	0.66	-1.3
3,683,817	+		MIT1002_03301	0.67	+1.0
3,683,888	+		MIT1002_03301	0.72	+1.3
3,683,888	+		MIT1002_03301	0.72	-0.2
3,683,888	+		MIT1002_03301	0.72	-0.3
3,683,896	-		MIT1002_03301	0.73	-0.4
3,683,896	-		MIT1002_03301	0.73	+0.3
3,683,911	+		MIT1002_03301	0.74	-3.3
3,683,967	+		MIT1002_03301	0.78	-1.2
3,683,967	+		MIT1002_03301	0.78	+2.5
3,683,975	-		MIT1002_03301	0.79	-0.7
3,683,975	-		MIT1002_03301	0.79	-0.5
3,684,024	-		MIT1002_03301	0.82	+0.2
3,684,058	-		MIT1002_03301	0.85	-0.3
3,684,088	-		MIT1002_03301	0.87	+0.6
3,684,125	+		MIT1002_03301	0.89	-1.7
3,684,125	+		MIT1002_03301	0.89	+0.7
3,684,125	+		MIT1002_03301	0.89	+0.1
3,684,153	-				+0.9
3,684,355	+				-0.5
3,684,355	+				+0.6
3,684,374	-				-0.1
3,684,421	+		MIT1002_03302	0.11	+2.1
3,684,421	+		MIT1002_03302	0.11	+0.6
3,684,423	+		MIT1002_03302	0.11	-1.2
3,684,423	+		MIT1002_03302	0.11	-0.7
3,684,423	+		MIT1002_03302	0.11	-0.9
3,684,423	+		MIT1002_03302	0.11	-0.2
3,684,429	-		MIT1002_03302	0.12	-0.3
3,684,431	-		MIT1002_03302	0.12	-0.6
3,684,431	-		MIT1002_03302	0.12	+0.6
3,684,647	-		MIT1002_03302	0.35	-0.1
3,684,712	-		MIT1002_03302	0.42	-0.8
3,684,748	+		MIT1002_03302	0.46	-1.8
3,684,766	-		MIT1002_03302	0.48	-0.6
3,684,791	+		MIT1002_03302	0.50	+1.5
3,684,797	+		MIT1002_03302	0.51	+0.6
3,684,799	-		MIT1002_03302	0.51	+0.9
3,684,807	+		MIT1002_03302	0.52	-1.1
3,684,858	+		MIT1002_03302	0.58	-1.0
3,684,858	+		MIT1002_03302	0.58	-0.3
3,684,860	-		MIT1002_03302	0.58	-0.8
3,684,860	-		MIT1002_03302	0.58	-0.8
3,684,867	-		MIT1002_03302	0.58	+0.7
3,684,887	+		MIT1002_03302	0.61	-0.5
3,684,897	+		MIT1002_03302	0.62	+1.6
3,684,931	+		MIT1002_03302	0.65	-1.8
3,685,162	+		MIT1002_03302	0.90	+0.2
3,685,168	+				-0.0
3,685,183	-				-0.1
3,685,208	+				-0.1
3,685,208	+				+1.5
3,685,208	+				-0.2
3,685,208	+				-0.5
3,685,214	-				+0.9
3,685,223	+				-1.4
3,685,231	-				+0.5
3,685,355	+				-1.6
3,685,444	-		MIT1002_03303	0.18	+1.8
3,685,472	-		MIT1002_03303	0.22	-2.4
3,685,474	+		MIT1002_03303	0.22	+0.4
3,685,474	+		MIT1002_03303	0.22	-2.6
3,685,482	-		MIT1002_03303	0.23	-0.0
3,685,513	+		MIT1002_03303	0.27	-0.2
3,685,513	+		MIT1002_03303	0.27	-0.1
3,685,521	-		MIT1002_03303	0.28	+1.3
3,685,528	-		MIT1002_03303	0.29	+0.2
3,685,528	-		MIT1002_03303	0.29	-2.1
3,685,544	-		MIT1002_03303	0.31	-0.5
3,685,601	+		MIT1002_03303	0.39	+1.1
3,685,601	+		MIT1002_03303	0.39	+0.1
3,685,609	-		MIT1002_03303	0.40	-0.0
3,685,674	+		MIT1002_03303	0.48	+0.2
3,685,677	-		MIT1002_03303	0.48	-0.7
3,685,691	+		MIT1002_03303	0.50	-0.3
3,685,693	+		MIT1002_03303	0.50	+0.7
3,685,710	+		MIT1002_03303	0.53	+0.3
3,685,720	+		MIT1002_03303	0.54	+0.1
3,685,728	-		MIT1002_03303	0.55	-1.5
3,685,806	-		MIT1002_03303	0.65	-1.3
3,685,813	-		MIT1002_03303	0.66	+1.5
3,685,848	+		MIT1002_03303	0.70	+0.5
3,685,855	+		MIT1002_03303	0.71	-2.4
3,685,856	-		MIT1002_03303	0.71	+0.1
3,685,863	+		MIT1002_03303	0.72	-1.2
3,685,989	+		MIT1002_03303	0.89	-0.2
3,685,990	+		MIT1002_03303	0.89	-1.0
3,685,997	-		MIT1002_03303	0.90	-0.6
3,686,097	+				+0.5
3,686,097	+				+0.5
3,686,174	+				+0.6
3,686,174	-				+2.0
3,686,198	-				+0.2