Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03178

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
3,542,239	+				-0.8
3,542,247	-				+0.1
3,542,334	+				-4.4
3,542,335	+				-3.8
3,542,335	+				-3.9
3,542,335	+				-2.1
3,542,343	-				-4.0
3,542,357	-		MIT1002_03179	0.11	-2.7
3,542,362	-		MIT1002_03179	0.11	-3.4
3,542,367	-		MIT1002_03179	0.11	-3.1
3,542,448	+		MIT1002_03179	0.18	-4.8
3,542,464	-		MIT1002_03179	0.20	-4.4
3,542,551	+		MIT1002_03179	0.27	-1.8
3,542,551	+		MIT1002_03179	0.27	-3.6
3,542,551	+		MIT1002_03179	0.27	-2.9
3,542,559	-		MIT1002_03179	0.28	-5.1
3,542,559	-		MIT1002_03179	0.28	-4.7
3,542,559	-		MIT1002_03179	0.28	-2.7
3,542,684	-		MIT1002_03179	0.38	-3.2
3,542,702	+		MIT1002_03179	0.40	-4.8
3,542,703	+		MIT1002_03179	0.40	-5.1
3,542,703	+		MIT1002_03179	0.40	-4.4
3,542,781	+		MIT1002_03179	0.47	-5.1
3,542,782	-		MIT1002_03179	0.47	-0.5
3,542,861	+		MIT1002_03179	0.53	-4.1
3,542,869	-		MIT1002_03179	0.54	-2.1
3,542,935	-		MIT1002_03179	0.60	-3.0
3,542,993	+		MIT1002_03179	0.65	-4.3
3,543,097	+		MIT1002_03179	0.73	-3.5
3,543,118	-		MIT1002_03179	0.75	-3.9
3,543,118	-		MIT1002_03179	0.75	-5.2
3,543,118	-		MIT1002_03179	0.75	-4.7
3,543,155	+		MIT1002_03179	0.78	-5.6
3,543,190	+		MIT1002_03179	0.81	-3.5
3,543,190	+		MIT1002_03179	0.81	-1.5
3,543,190	+		MIT1002_03179	0.81	-0.8