Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03165

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
3,527,050	+		MIT1002_03163	0.28	+0.4
3,527,057	-		MIT1002_03163	0.29	+0.3
3,527,067	-		MIT1002_03163	0.30	-2.9
3,527,111	-		MIT1002_03163	0.35	-0.1
3,527,111	-		MIT1002_03163	0.35	+0.8
3,527,149	+		MIT1002_03163	0.40	+1.9
3,527,149	-		MIT1002_03163	0.40	+2.6
3,527,149	-		MIT1002_03163	0.40	-0.8
3,527,183	+		MIT1002_03163	0.44	-1.0
3,527,191	-		MIT1002_03163	0.45	-1.2
3,527,193	-		MIT1002_03163	0.45	+0.1
3,527,193	-		MIT1002_03163	0.45	-2.9
3,527,230	+		MIT1002_03163	0.49	-0.8
3,527,230	+		MIT1002_03163	0.49	+0.2
3,527,230	+		MIT1002_03163	0.49	-0.8
3,527,231	+		MIT1002_03163	0.50	+0.4
3,527,238	-		MIT1002_03163	0.50	+0.5
3,527,240	-		MIT1002_03163	0.51	+0.2
3,527,284	+		MIT1002_03163	0.56	-0.9
3,527,292	+		MIT1002_03163	0.57	+0.0
3,527,360	+		MIT1002_03163	0.65	+0.7
3,527,519	+		MIT1002_03163	0.84	+1.4
3,527,572	+				-3.3
3,527,634	+				+0.8
3,527,705	-				+0.2
3,527,979	+				+0.1
3,528,027	+				-0.8
3,528,106	-		MIT1002_03165	0.18	-0.7
3,528,155	-		MIT1002_03165	0.24	-2.1
3,528,364	-		MIT1002_03165	0.50	-0.2
3,528,364	-		MIT1002_03165	0.50	-0.1
3,528,379	-		MIT1002_03165	0.52	-0.5
3,528,402	-		MIT1002_03165	0.55	-0.5
3,528,456	-		MIT1002_03165	0.61	+0.8
3,528,628	+		MIT1002_03165	0.82	-0.7
3,528,636	-		MIT1002_03165	0.83	-0.5
3,528,699	-				+0.3
3,528,780	+				-1.8
3,528,819	-				-2.0
3,528,819	-				+0.3
3,528,819	-				-0.2
3,528,819	-				+2.1
3,528,861	-				+0.5
3,528,863	+				-1.0
3,529,027	+		MIT1002_03166	0.29	+0.9
3,529,035	-		MIT1002_03166	0.30	+0.4
3,529,035	-		MIT1002_03166	0.30	-0.4
3,529,064	+		MIT1002_03166	0.34	+0.7
3,529,064	+		MIT1002_03166	0.34	+1.3
3,529,095	+		MIT1002_03166	0.38	-0.6
3,529,098	-		MIT1002_03166	0.38	-3.7
3,529,098	-		MIT1002_03166	0.38	-0.5
3,529,258	+		MIT1002_03166	0.58	+0.8
3,529,312	-		MIT1002_03166	0.65	-0.2
3,529,330	+		MIT1002_03166	0.68	-1.0
3,529,331	-		MIT1002_03166	0.68	-0.2
3,529,353	+		MIT1002_03166	0.71	-0.3
3,529,361	-		MIT1002_03166	0.72	+1.0
3,529,395	+		MIT1002_03166	0.76	+1.5
3,529,413	+		MIT1002_03166	0.78	+0.6
3,529,421	-		MIT1002_03166	0.79	-0.1
3,529,465	-		MIT1002_03166	0.85	+0.3
3,529,531	+				-0.9
3,529,534	+				+0.0
3,529,536	+				+1.4
3,529,544	-				-0.2
3,529,544	-				+1.5
3,529,544	-				+1.5
3,529,544	-				-0.2
3,529,544	-				-0.5
3,529,548	+				+0.1
3,529,618	-				-1.7
3,529,666	-				+1.0
3,529,676	-				+1.1
3,529,733	+				-0.1
3,529,734	-				-1.0
3,529,736	-				-1.1
3,529,741	-				-0.8
3,529,741	-				+0.6
3,529,741	-				-0.7
3,529,754	+				+0.5