Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03095

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
3,449,025	+		MIT1002_03094	0.21	-0.5
3,449,025	+		MIT1002_03094	0.21	+0.2
3,449,030	+		MIT1002_03094	0.22	-1.2
3,449,030	+		MIT1002_03094	0.22	+0.5
3,449,033	-		MIT1002_03094	0.22	-0.5
3,449,038	-		MIT1002_03094	0.23	-1.4
3,449,038	-		MIT1002_03094	0.23	-0.1
3,449,078	+		MIT1002_03094	0.27	-0.1
3,449,086	-		MIT1002_03094	0.27	-0.5
3,449,086	-		MIT1002_03094	0.27	-0.2
3,449,118	+		MIT1002_03094	0.30	-2.8
3,449,118	+		MIT1002_03094	0.30	-0.5
3,449,118	+		MIT1002_03094	0.30	+0.1
3,449,146	-		MIT1002_03094	0.33	+0.9
3,449,169	+		MIT1002_03094	0.35	+0.5
3,449,174	+		MIT1002_03094	0.36	+2.5
3,449,177	-		MIT1002_03094	0.36	-1.5
3,449,210	-		MIT1002_03094	0.39	+0.6
3,449,210	-		MIT1002_03094	0.39	-0.5
3,449,305	+		MIT1002_03094	0.49	-1.7
3,449,315	+		MIT1002_03094	0.50	-1.4
3,449,315	+		MIT1002_03094	0.50	+0.3
3,449,335	-		MIT1002_03094	0.52	-0.8
3,449,339	-		MIT1002_03094	0.52	+0.6
3,449,374	-		MIT1002_03094	0.55	-1.2
3,449,519	+		MIT1002_03094	0.69	+1.1
3,449,654	+		MIT1002_03094	0.83	+0.9
3,449,703	-		MIT1002_03094	0.87	+0.4
3,449,739	-				-0.7
3,449,744	-				-0.4
3,449,748	+				+0.9
3,449,768	-				-2.4
3,449,774	-				-1.1
3,449,926	-				-1.0
3,449,973	+				-2.4
3,450,037	+		MIT1002_03095	0.25	-0.4
3,450,055	-		MIT1002_03095	0.29	+0.2
3,450,055	-		MIT1002_03095	0.29	+0.7
3,450,162	-		MIT1002_03095	0.56	-0.2
3,450,164	+		MIT1002_03095	0.57	+1.1
3,450,197	-		MIT1002_03095	0.65	-1.4
3,450,222	+		MIT1002_03095	0.71	-1.3
3,450,232	+		MIT1002_03095	0.74	-1.2
3,450,308	-				-0.9
3,450,547	-				-5.6
3,450,601	-				-1.2
3,450,622	-				-0.5
3,450,673	+				-4.2
3,450,673	+				-4.3
3,450,673	+				-4.2
3,450,708	-		MIT1002_03096	0.11	-4.2
3,450,772	+		MIT1002_03096	0.15	-0.2
3,450,848	-		MIT1002_03096	0.19	-2.8
3,450,865	+		MIT1002_03096	0.20	-1.0
3,450,930	+		MIT1002_03096	0.24	-6.4
3,450,930	+		MIT1002_03096	0.24	-4.0
3,450,938	-		MIT1002_03096	0.24	-1.8
3,450,950	+		MIT1002_03096	0.25	-5.6
3,450,970	+		MIT1002_03096	0.26	-4.0
3,451,050	+		MIT1002_03096	0.31	-3.0
3,451,106	+		MIT1002_03096	0.34	-5.5
3,451,227	-		MIT1002_03096	0.41	-2.6
3,451,230	+		MIT1002_03096	0.41	-3.2
3,451,238	-		MIT1002_03096	0.42	-3.1