Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02933

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
3,259,849	+				-0.8
3,259,906	-				-0.2
3,259,971	-		MIT1002_02932	0.16	-0.9
3,259,982	-		MIT1002_02932	0.17	+1.7
3,260,061	+		MIT1002_02932	0.24	+0.2
3,260,183	+		MIT1002_02932	0.36	-0.6
3,260,188	-		MIT1002_02932	0.37	-0.3
3,260,215	+		MIT1002_02932	0.39	+1.2
3,260,232	-		MIT1002_02932	0.41	-1.0
3,260,264	-		MIT1002_02932	0.44	+0.8
3,260,266	+		MIT1002_02932	0.44	-0.8
3,260,266	+		MIT1002_02932	0.44	-0.3
3,260,274	-		MIT1002_02932	0.45	-0.2
3,260,290	-		MIT1002_02932	0.47	+0.7
3,260,298	-		MIT1002_02932	0.48	-1.5
3,260,331	+		MIT1002_02932	0.51	+1.2
3,260,331	+		MIT1002_02932	0.51	+1.4
3,260,337	-		MIT1002_02932	0.51	-0.8
3,260,339	-		MIT1002_02932	0.52	-1.4
3,260,446	+		MIT1002_02932	0.62	-2.2
3,260,518	-		MIT1002_02932	0.69	-2.4
3,260,618	-		MIT1002_02932	0.79	+1.0
3,260,648	+		MIT1002_02932	0.82	+1.3
3,260,836	+				-1.6
3,260,914	+				+0.1
3,260,922	-				-2.2
3,260,946	+				-1.5
3,260,986	+				+0.3
3,260,986	+				-1.0
3,260,986	+				-1.1
3,260,986	+				-0.8
3,260,994	-				-0.5
3,260,994	-				+0.2
3,260,994	-				+1.0
3,260,994	-				-1.4
3,260,994	-				-0.4
3,260,994	-				+0.1
3,260,994	-				-1.2
3,261,010	+				-0.5
3,261,018	-				+0.9
3,261,018	-				-1.0
3,261,018	-				-1.5
3,261,054	+		MIT1002_02933	0.10	+1.8
3,261,062	-		MIT1002_02933	0.11	-3.9
3,261,062	-		MIT1002_02933	0.11	+1.3
3,261,172	-		MIT1002_02933	0.16	-0.0
3,261,289	+		MIT1002_02933	0.21	+0.3
3,261,289	+		MIT1002_02933	0.21	+0.0
3,261,297	-		MIT1002_02933	0.21	-0.2
3,261,297	-		MIT1002_02933	0.21	+1.0
3,261,297	-		MIT1002_02933	0.21	+3.0
3,261,436	+		MIT1002_02933	0.28	-0.2
3,261,470	+		MIT1002_02933	0.29	-0.0
3,261,526	-		MIT1002_02933	0.32	+0.4
3,261,526	-		MIT1002_02933	0.32	-0.3
3,261,549	+		MIT1002_02933	0.33	-0.0
3,261,624	-		MIT1002_02933	0.36	+0.0
3,261,626	+		MIT1002_02933	0.36	+1.2
3,261,629	-		MIT1002_02933	0.36	+0.9
3,261,644	-		MIT1002_02933	0.37	-0.2
3,261,702	-		MIT1002_02933	0.40	-0.0
3,261,716	+		MIT1002_02933	0.40	+1.0
3,261,723	+		MIT1002_02933	0.41	-0.8
3,261,731	-		MIT1002_02933	0.41	+0.0
3,261,766	-		MIT1002_02933	0.43	-1.8
3,261,787	-		MIT1002_02933	0.44	-0.1
3,261,843	+		MIT1002_02933	0.46	-1.0
3,261,843	+		MIT1002_02933	0.46	+0.5
3,261,850	-		MIT1002_02933	0.46	+1.1
3,261,872	-		MIT1002_02933	0.47	+0.1
3,261,952	+		MIT1002_02933	0.51	-0.8
3,262,006	+		MIT1002_02933	0.53	-1.2
3,262,066	+		MIT1002_02933	0.56	-1.0
3,262,116	+		MIT1002_02933	0.58	+0.5
3,262,179	+		MIT1002_02933	0.61	+2.2
3,262,187	-		MIT1002_02933	0.62	-0.2
3,262,199	-		MIT1002_02933	0.62	+1.8
3,262,207	+		MIT1002_02933	0.63	+0.6
3,262,215	-		MIT1002_02933	0.63	-0.8
3,262,300	+		MIT1002_02933	0.67	-1.7
3,262,308	-		MIT1002_02933	0.67	-0.0
3,262,308	-		MIT1002_02933	0.67	+0.1
3,262,313	-		MIT1002_02933	0.67	-2.0
3,262,382	+		MIT1002_02933	0.70	+1.5
3,262,416	-		MIT1002_02933	0.72	+0.9
3,262,423	-		MIT1002_02933	0.72	+0.2
3,262,467	+		MIT1002_02933	0.74	-1.3
3,262,475	-		MIT1002_02933	0.75	+0.8
3,262,527	-		MIT1002_02933	0.77	+0.6
3,262,594	+		MIT1002_02933	0.80	+0.3
3,262,594	+		MIT1002_02933	0.80	-1.1
3,262,643	+		MIT1002_02933	0.82	+0.6
3,262,643	+		MIT1002_02933	0.82	-2.1
3,262,643	+		MIT1002_02933	0.82	-0.5
3,262,651	-		MIT1002_02933	0.83	+0.1
3,262,670	+		MIT1002_02933	0.83	+0.3
3,262,678	-		MIT1002_02933	0.84	+1.0
3,262,683	-		MIT1002_02933	0.84	+1.2
3,262,761	+		MIT1002_02933	0.88	+0.5
3,262,763	-		MIT1002_02933	0.88	+0.0
3,262,814	+				+0.1
3,262,902	+				-0.8
3,263,024	+				-0.3
3,263,024	+				-2.9
3,263,032	-				+0.2
3,263,096	-				-0.5
3,263,102	+				+0.9
3,263,146	+				-0.4
3,263,154	-				+1.2
3,263,260	+				-0.5
3,263,268	-				+2.6
3,263,268	-				+1.7
3,263,268	-				-1.0
3,263,268	-				+0.7
3,263,379	+				-0.5
3,263,532	+				+0.2
3,263,532	-				+0.4
3,263,533	-				+0.5
3,263,594	+				-0.6
3,263,604	+				-1.1
3,263,677	-		MIT1002_02934	0.13	-4.1
3,263,705	+		MIT1002_02934	0.15	-1.0
3,263,734	+		MIT1002_02934	0.16	-2.4
3,263,742	-		MIT1002_02934	0.17	+0.3
3,263,815	-		MIT1002_02934	0.21	-1.5
3,263,846	+		MIT1002_02934	0.23	-1.8
3,263,984	+		MIT1002_02934	0.32	+1.5
3,263,988	-		MIT1002_02934	0.32	-0.4
3,263,989	+		MIT1002_02934	0.32	+0.7
3,263,997	-		MIT1002_02934	0.33	-0.3
3,264,014	+		MIT1002_02934	0.34	-1.0