Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02885

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
3,201,285	+				-0.8
3,201,361	-		MIT1002_02884	0.13	-1.0
3,201,401	+		MIT1002_02884	0.21	+0.7
3,201,409	-		MIT1002_02884	0.22	+0.0
3,201,459	+		MIT1002_02884	0.31	-1.8
3,201,497	-		MIT1002_02884	0.38	-0.7
3,201,505	-		MIT1002_02884	0.39	+0.8
3,201,535	-		MIT1002_02884	0.45	-0.1
3,201,665	+		MIT1002_02884	0.68	-0.2
3,201,666	-		MIT1002_02884	0.68	+0.2
3,201,673	-		MIT1002_02884	0.70	-0.3
3,201,673	-		MIT1002_02884	0.70	-0.5
3,201,874	+				+0.2
3,201,882	-				+0.4
3,201,933	+				+0.7
3,201,933	+				+0.4
3,201,933	+				-0.3
3,201,933	+				-0.4
3,201,933	+				+0.1
3,201,933	+				+1.1
3,201,941	-				+1.4
3,201,958	+				-0.2
3,201,958	+				+1.3
3,201,958	+				+1.0
3,201,965	-				+0.1
3,201,966	-				+0.3
3,201,966	-				+0.5
3,201,966	-				+1.2
3,201,966	-				+1.2
3,201,975	-				+0.6
3,201,987	-				+0.3
3,201,999	+				-0.5
3,202,034	+				-1.2
3,202,218	-				+0.2
3,202,361	+				-0.5
3,202,364	-				-1.2
3,202,401	+				-0.5
3,202,495	+		MIT1002_02885	0.11	-1.9
3,202,496	-		MIT1002_02885	0.11	+0.4
3,202,503	-		MIT1002_02885	0.11	-1.8
3,202,504	+		MIT1002_02885	0.11	-1.5
3,202,512	-		MIT1002_02885	0.12	-1.7
3,202,565	+		MIT1002_02885	0.14	-0.6
3,202,575	-		MIT1002_02885	0.14	-0.1
3,202,640	+		MIT1002_02885	0.17	+0.4
3,202,648	-		MIT1002_02885	0.18	-1.1
3,202,664	+		MIT1002_02885	0.18	-1.8
3,202,672	-		MIT1002_02885	0.19	-1.9
3,202,672	-		MIT1002_02885	0.19	-1.5
3,202,689	+		MIT1002_02885	0.19	-0.5
3,202,697	-		MIT1002_02885	0.20	-2.3
3,202,872	+		MIT1002_02885	0.28	-0.3
3,202,955	+		MIT1002_02885	0.31	-2.2
3,202,955	+		MIT1002_02885	0.31	+0.2
3,202,986	+		MIT1002_02885	0.33	-0.7
3,202,994	-		MIT1002_02885	0.33	-0.4
3,202,994	-		MIT1002_02885	0.33	+0.3
3,203,066	+		MIT1002_02885	0.36	-0.8
3,203,076	+		MIT1002_02885	0.37	-1.0
3,203,083	+		MIT1002_02885	0.37	-2.3
3,203,147	+		MIT1002_02885	0.40	-1.5
3,203,221	+		MIT1002_02885	0.43	-3.0
3,203,227	-		MIT1002_02885	0.43	-0.1
3,203,350	+		MIT1002_02885	0.49	+0.4
3,203,351	+		MIT1002_02885	0.49	-0.6
3,203,351	+		MIT1002_02885	0.49	-1.5
3,203,358	-		MIT1002_02885	0.49	-0.5
3,203,359	-		MIT1002_02885	0.49	+0.5
3,203,359	-		MIT1002_02885	0.49	-1.4
3,203,359	-		MIT1002_02885	0.49	-2.2
3,203,359	-		MIT1002_02885	0.49	-2.1
3,203,372	+		MIT1002_02885	0.50	-0.4
3,203,405	-		MIT1002_02885	0.51	+0.1
3,203,410	+		MIT1002_02885	0.51	+0.4
3,203,427	+		MIT1002_02885	0.52	-0.9
3,203,435	-		MIT1002_02885	0.53	-2.5
3,203,453	-		MIT1002_02885	0.53	+0.3
3,203,463	-		MIT1002_02885	0.54	-2.1
3,203,476	+		MIT1002_02885	0.54	+1.0
3,203,476	+		MIT1002_02885	0.54	-0.3
3,203,484	-		MIT1002_02885	0.55	-1.1
3,203,506	-		MIT1002_02885	0.56	-1.0
3,203,600	-		MIT1002_02885	0.60	-0.7
3,203,615	+		MIT1002_02885	0.61	-1.8
3,203,716	-		MIT1002_02885	0.65	-0.6
3,203,718	+		MIT1002_02885	0.65	-0.1
3,203,721	-		MIT1002_02885	0.65	-1.5
3,203,747	+		MIT1002_02885	0.66	+0.0
3,203,836	+		MIT1002_02885	0.70	-1.6
3,203,836	+		MIT1002_02885	0.70	-2.7
3,203,886	-		MIT1002_02885	0.73	-1.3
3,203,900	+		MIT1002_02885	0.73	-1.0
3,203,948	-		MIT1002_02885	0.75	-1.5
3,203,950	-		MIT1002_02885	0.75	-2.1
3,203,981	+		MIT1002_02885	0.77	-1.4
3,203,996	-		MIT1002_02885	0.78	-1.2
3,204,027	-		MIT1002_02885	0.79	-0.8
3,204,092	-		MIT1002_02885	0.82	-0.9
3,204,106	-		MIT1002_02885	0.82	-1.6
3,204,156	-		MIT1002_02885	0.85	-0.2
3,204,250	+		MIT1002_02885	0.89	-2.9
3,204,296	+				-0.6
3,204,304	-				-2.0
3,204,326	+				+0.2
3,204,447	+				+0.3
3,204,548	-				+0.2
3,204,571	-				-0.3
3,204,596	-				+0.8
3,204,601	-				+1.0
3,204,601	-				-0.5
3,204,604	+				-1.5
3,204,636	+				+0.8
3,204,730	+		MIT1002_02886	0.12	+0.8
3,204,738	-		MIT1002_02886	0.13	-0.5
3,204,739	+		MIT1002_02886	0.13	+2.2
3,204,747	-		MIT1002_02886	0.14	-1.3
3,204,829	-		MIT1002_02886	0.26	+0.1
3,204,923	+		MIT1002_02886	0.39	-0.5
3,204,923	+		MIT1002_02886	0.39	+0.4
3,204,929	-		MIT1002_02886	0.39	-0.5
3,204,933	+		MIT1002_02886	0.40	+0.5
3,204,933	+		MIT1002_02886	0.40	-0.6
3,204,965	+		MIT1002_02886	0.44	-1.5
3,204,965	+		MIT1002_02886	0.44	-0.8
3,204,965	+		MIT1002_02886	0.44	+0.9
3,204,973	-		MIT1002_02886	0.46	+0.1
3,204,973	-		MIT1002_02886	0.46	+1.1
3,204,983	-		MIT1002_02886	0.47	+1.4
3,205,009	-		MIT1002_02886	0.51	-0.6
3,205,018	-		MIT1002_02886	0.52	-0.8
3,205,110	+		MIT1002_02886	0.65	-0.1
3,205,199	+		MIT1002_02886	0.77	+1.5
3,205,207	-		MIT1002_02886	0.78	-0.3
3,205,236	+		MIT1002_02886	0.82	-0.2
3,205,244	-		MIT1002_02886	0.83	-1.8
3,205,338	+				-3.9
3,205,338	+				-0.9
3,205,346	-				-0.2
3,205,346	-				+0.1
3,205,346	-				-2.9
3,205,427	-				+0.1
3,205,462	+				-0.3
3,205,462	+				-0.4
3,205,473	-				+1.2
3,205,496	+				+0.1