Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02865

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
3,177,679	+		MIT1002_02863	0.77	-0.6
3,177,679	+		MIT1002_02863	0.77	+0.6
3,177,679	+		MIT1002_02863	0.77	-1.3
3,177,679	+		MIT1002_02863	0.77	-1.0
3,177,679	+		MIT1002_02863	0.77	-2.1
3,177,679	+		MIT1002_02863	0.77	-0.2
3,177,679	+		MIT1002_02863	0.77	+2.2
3,177,681	+		MIT1002_02863	0.77	-0.3
3,177,684	+		MIT1002_02863	0.78	+2.5
3,177,686	-		MIT1002_02863	0.78	+0.2
3,177,687	-		MIT1002_02863	0.79	+0.1
3,177,687	-		MIT1002_02863	0.79	-0.4
3,177,687	-		MIT1002_02863	0.79	+0.1
3,177,687	-		MIT1002_02863	0.79	+1.6
3,177,687	-		MIT1002_02863	0.79	-1.1
3,177,687	-		MIT1002_02863	0.79	+0.5
3,177,687	-		MIT1002_02863	0.79	-1.8
3,177,687	-		MIT1002_02863	0.79	+0.7
3,177,689	+		MIT1002_02863	0.79	+0.3
3,177,689	+		MIT1002_02863	0.79	+0.6
3,177,697	-		MIT1002_02863	0.81	+0.6
3,177,717	-		MIT1002_02863	0.85	-0.9
3,177,717	-		MIT1002_02863	0.85	-1.7
3,177,781	+				+0.1
3,177,797	-				+0.4
3,177,815	+				-1.3
3,177,823	-				+0.9
3,177,823	-				-0.8
3,177,825	-				+1.0
3,177,828	+				+1.0
3,177,833	-				-1.2
3,177,834	+				-0.4
3,177,834	+				-0.2
3,177,835	-				-0.2
3,177,835	-				+1.8
3,177,935	+		MIT1002_02864	0.13	+0.6
3,177,963	+		MIT1002_02864	0.16	+1.7
3,177,971	-		MIT1002_02864	0.17	+0.9
3,177,979	+		MIT1002_02864	0.18	+0.4
3,177,982	-		MIT1002_02864	0.19	+0.3
3,177,984	+		MIT1002_02864	0.19	+1.4
3,177,987	-		MIT1002_02864	0.19	-0.7
3,178,021	+		MIT1002_02864	0.23	+0.6
3,178,021	+		MIT1002_02864	0.23	+0.0
3,178,021	+		MIT1002_02864	0.23	+0.9
3,178,021	+		MIT1002_02864	0.23	+0.5
3,178,021	+		MIT1002_02864	0.23	-0.1
3,178,021	+		MIT1002_02864	0.23	+0.3
3,178,029	-		MIT1002_02864	0.24	-0.5
3,178,029	-		MIT1002_02864	0.24	-2.2
3,178,029	-		MIT1002_02864	0.24	-0.4
3,178,029	-		MIT1002_02864	0.24	-1.2
3,178,029	-		MIT1002_02864	0.24	-1.1
3,178,029	-		MIT1002_02864	0.24	-0.4
3,178,047	+		MIT1002_02864	0.27	-0.4
3,178,067	+		MIT1002_02864	0.29	+1.3
3,178,149	-		MIT1002_02864	0.40	-0.1
3,178,170	-		MIT1002_02864	0.42	-1.1
3,178,181	-		MIT1002_02864	0.44	+1.9
3,178,289	-		MIT1002_02864	0.57	+0.4
3,178,356	+		MIT1002_02864	0.66	+1.0
3,178,364	-		MIT1002_02864	0.67	-2.6
3,178,368	+		MIT1002_02864	0.67	+1.9
3,178,466	-		MIT1002_02864	0.80	+1.0
3,178,504	+		MIT1002_02864	0.85	+1.4
3,178,504	+		MIT1002_02864	0.85	+1.4
3,178,512	-		MIT1002_02864	0.86	+1.6
3,178,512	-		MIT1002_02864	0.86	-1.6
3,178,555	+				+0.3
3,178,555	+				-0.0
3,178,557	+				-0.6
3,178,563	-				+0.3
3,178,563	-				+0.1
3,178,565	-				-1.2
3,178,571	-				+0.1
3,178,573	+				+0.5
3,178,573	+				+0.4
3,178,573	+				-0.4
3,178,581	+				+0.8
3,178,581	-				-0.4
3,178,581	-				-0.7
3,178,655	+				-2.0
3,178,663	-				+1.3
3,178,663	-				-2.7
3,178,778	+				-1.0
3,178,780	+				+0.2
3,178,824	-		MIT1002_02865	0.11	-0.5
3,178,846	+		MIT1002_02865	0.12	+1.0
3,178,979	+		MIT1002_02865	0.19	+0.1
3,179,013	-		MIT1002_02865	0.21	+0.1
3,179,013	-		MIT1002_02865	0.21	+0.5
3,179,052	+		MIT1002_02865	0.23	+1.3
3,179,077	+		MIT1002_02865	0.24	-0.7
3,179,093	+		MIT1002_02865	0.25	+0.3
3,179,101	-		MIT1002_02865	0.25	+1.1
3,179,101	-		MIT1002_02865	0.25	-0.3
3,179,153	-		MIT1002_02865	0.28	+0.1
3,179,153	-		MIT1002_02865	0.28	-2.0
3,179,265	-		MIT1002_02865	0.34	-0.0
3,179,305	-		MIT1002_02865	0.36	+0.5
3,179,309	+		MIT1002_02865	0.36	+1.2
3,179,391	-		MIT1002_02865	0.40	+0.5
3,179,391	-		MIT1002_02865	0.40	+1.6
3,179,403	+		MIT1002_02865	0.41	+1.9
3,179,414	+		MIT1002_02865	0.42	+0.2
3,179,466	+		MIT1002_02865	0.44	+0.9
3,179,479	+		MIT1002_02865	0.45	-0.1
3,179,503	+		MIT1002_02865	0.46	+0.5
3,179,508	+		MIT1002_02865	0.46	-0.2
3,179,534	+		MIT1002_02865	0.48	-0.4
3,179,695	+		MIT1002_02865	0.56	-0.5
3,179,710	-		MIT1002_02865	0.57	+0.2
3,179,737	+		MIT1002_02865	0.58	+1.2
3,179,812	+		MIT1002_02865	0.62	+1.5
3,179,857	-		MIT1002_02865	0.65	+0.7
3,179,912	-		MIT1002_02865	0.68	-0.6
3,179,996	-		MIT1002_02865	0.72	-1.1
3,180,001	+		MIT1002_02865	0.72	+0.6
3,180,001	-		MIT1002_02865	0.72	+0.9
3,180,007	-		MIT1002_02865	0.73	-0.1
3,180,017	-		MIT1002_02865	0.73	+0.2
3,180,024	-		MIT1002_02865	0.74	-1.1
3,180,064	+		MIT1002_02865	0.76	+0.5
3,180,064	-		MIT1002_02865	0.76	+0.5
3,180,140	-		MIT1002_02865	0.80	+0.7
3,180,147	+		MIT1002_02865	0.80	+0.4
3,180,149	+		MIT1002_02865	0.80	-1.9
3,180,156	-		MIT1002_02865	0.80	+0.3
3,180,214	+		MIT1002_02865	0.83	+0.2
3,180,216	+		MIT1002_02865	0.84	-2.9
3,180,222	-		MIT1002_02865	0.84	-1.3
3,180,282	-		MIT1002_02865	0.87	-0.6
3,180,282	-		MIT1002_02865	0.87	+0.5
3,180,282	-		MIT1002_02865	0.87	+0.8
3,180,287	-		MIT1002_02865	0.87	-0.1
3,180,289	+		MIT1002_02865	0.87	-1.2
3,180,297	-		MIT1002_02865	0.88	+0.9
3,180,297	-		MIT1002_02865	0.88	-0.5
3,180,325	+		MIT1002_02865	0.89	+1.0
3,180,338	-				+0.3
3,180,452	+				-0.5
3,180,452	+				-0.1
3,180,452	+				+0.6
3,180,460	-				+1.0
3,180,460	-				-0.8
3,180,471	+				+0.5
3,180,584	-				-0.2
3,180,585	+				+0.1
3,180,597	+				+1.3
3,180,602	+				+0.6
3,180,628	-				-0.1
3,180,751	+		MIT1002_02866	0.13	+0.6
3,180,753	-		MIT1002_02866	0.13	+0.4
3,180,787	-		MIT1002_02866	0.16	-0.1
3,180,795	-		MIT1002_02866	0.17	-0.2
3,180,849	-		MIT1002_02866	0.22	+0.5
3,180,859	-		MIT1002_02866	0.23	-2.3
3,180,901	+		MIT1002_02866	0.27	+2.6
3,180,992	-		MIT1002_02866	0.35	-0.8
3,180,994	+		MIT1002_02866	0.35	-1.7
3,180,994	+		MIT1002_02866	0.35	-1.1
3,180,994	+		MIT1002_02866	0.35	+1.3
3,180,994	+		MIT1002_02866	0.35	-0.1
3,181,001	-		MIT1002_02866	0.36	+0.4
3,181,002	-		MIT1002_02866	0.36	-2.0
3,181,002	-		MIT1002_02866	0.36	+1.5
3,181,051	-		MIT1002_02866	0.40	-1.5
3,181,112	-		MIT1002_02866	0.46	-0.1
3,181,112	-		MIT1002_02866	0.46	-1.6
3,181,173	-		MIT1002_02866	0.52	+0.1
3,181,187	-		MIT1002_02866	0.53	+0.1
3,181,226	+		MIT1002_02866	0.57	+1.2
3,181,365	-		MIT1002_02866	0.70	+0.5
3,181,365	-		MIT1002_02866	0.70	-0.4
3,181,380	-		MIT1002_02866	0.71	+0.0
3,181,402	-		MIT1002_02866	0.73	-1.5
3,181,411	+		MIT1002_02866	0.74	+0.3
3,181,419	-		MIT1002_02866	0.75	-2.1
3,181,448	+		MIT1002_02866	0.77	+0.4
3,181,512	-		MIT1002_02866	0.83	+0.3