Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02821

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
3,124,000	+		MIT1002_02819	0.21	-0.4
3,124,008	-		MIT1002_02819	0.22	-2.0
3,124,043	+		MIT1002_02819	0.28	-2.0
3,124,043	+		MIT1002_02819	0.28	-0.4
3,124,049	-		MIT1002_02819	0.29	-0.4
3,124,049	-		MIT1002_02819	0.29	+1.2
3,124,060	-		MIT1002_02819	0.30	-1.2
3,124,078	-		MIT1002_02819	0.33	+0.0
3,124,231	+		MIT1002_02819	0.57	-0.5
3,124,251	+		MIT1002_02819	0.60	+0.5
3,124,251	+		MIT1002_02819	0.60	+0.5
3,124,258	-		MIT1002_02819	0.61	-0.8
3,124,259	-		MIT1002_02819	0.61	+1.1
3,124,259	-		MIT1002_02819	0.61	-1.4
3,124,259	-		MIT1002_02819	0.61	-1.1
3,124,266	-		MIT1002_02819	0.62	-0.6
3,124,294	-		MIT1002_02819	0.67	+0.8
3,124,337	+		MIT1002_02819	0.73	-0.8
3,124,347	-		MIT1002_02819	0.75	-1.0
3,124,379	-		MIT1002_02819	0.80	-2.5
3,124,402	+		MIT1002_02819	0.83	-2.3
3,124,475	-				-1.8
3,124,476	-				-0.5
3,124,537	+				-0.1
3,124,542	+				-0.9
3,124,550	-				+2.4
3,124,550	-				-1.1
3,124,550	-				+0.4
3,124,653	+		MIT1002_02820	0.31	+0.4
3,124,697	-		MIT1002_02820	0.41	-0.2
3,124,720	+		MIT1002_02820	0.47	+0.5
3,124,877	+		MIT1002_02820	0.84	+0.2
3,124,917	-				+0.5
3,124,917	-				-0.5
3,124,927	+				+1.0
3,124,945	-				-1.4
3,124,963	+				+0.5
3,124,969	-				-0.8
3,124,982	+				-2.3
3,124,982	+				-1.4
3,125,000	+				-1.8
3,125,030	-		MIT1002_02821	0.12	-0.1
3,125,066	-		MIT1002_02821	0.17	-0.9
3,125,145	-		MIT1002_02821	0.29	-2.6
3,125,180	+		MIT1002_02821	0.34	-0.2
3,125,180	+		MIT1002_02821	0.34	+0.6
3,125,191	-		MIT1002_02821	0.36	-1.4
3,125,209	-		MIT1002_02821	0.38	-0.0
3,125,214	+		MIT1002_02821	0.39	-1.2
3,125,237	+		MIT1002_02821	0.43	-0.0
3,125,255	+		MIT1002_02821	0.45	-0.1
3,125,255	+		MIT1002_02821	0.45	+1.3
3,125,255	+		MIT1002_02821	0.45	+1.2
3,125,288	-		MIT1002_02821	0.50	-0.3
3,125,332	+		MIT1002_02821	0.57	-2.0
3,125,351	-		MIT1002_02821	0.60	+0.9
3,125,355	+		MIT1002_02821	0.60	-0.4
3,125,400	-		MIT1002_02821	0.67	-1.2
3,125,408	-		MIT1002_02821	0.68	-0.7
3,125,436	+		MIT1002_02821	0.72	-1.3
3,125,444	-		MIT1002_02821	0.74	-0.5
3,125,444	-		MIT1002_02821	0.74	+0.4
3,125,512	+		MIT1002_02821	0.84	+1.0
3,125,522	+		MIT1002_02821	0.85	-0.9
3,125,775	+		MIT1002_02822	0.13	-0.6
3,125,783	-		MIT1002_02822	0.14	-0.4
3,125,809	-		MIT1002_02822	0.16	-0.6
3,125,831	-		MIT1002_02822	0.18	-0.5
3,125,869	+		MIT1002_02822	0.21	-1.0
3,125,869	+		MIT1002_02822	0.21	+0.1
3,125,869	+		MIT1002_02822	0.21	-1.4
3,125,869	+		MIT1002_02822	0.21	-3.0
3,125,877	-		MIT1002_02822	0.22	+0.6
3,125,925	+		MIT1002_02822	0.26	-2.5
3,126,073	-		MIT1002_02822	0.39	-1.3
3,126,075	+		MIT1002_02822	0.39	-0.2
3,126,083	-		MIT1002_02822	0.39	+0.4
3,126,158	+		MIT1002_02822	0.46	-0.5
3,126,172	+		MIT1002_02822	0.47	-0.5
3,126,180	-		MIT1002_02822	0.48	+0.8
3,126,188	-		MIT1002_02822	0.48	-1.3
3,126,190	+		MIT1002_02822	0.49	-0.9
3,126,190	+		MIT1002_02822	0.49	-0.7
3,126,190	+		MIT1002_02822	0.49	-0.4
3,126,190	+		MIT1002_02822	0.49	+0.4
3,126,190	+		MIT1002_02822	0.49	-2.6
3,126,199	+		MIT1002_02822	0.49	-0.7
3,126,205	-		MIT1002_02822	0.50	-1.5
3,126,209	+		MIT1002_02822	0.50	-2.6
3,126,209	+		MIT1002_02822	0.50	-2.5
3,126,225	+		MIT1002_02822	0.52	-1.4
3,126,262	-		MIT1002_02822	0.55	+0.3
3,126,277	-		MIT1002_02822	0.56	-2.0
3,126,314	+		MIT1002_02822	0.59	-0.9
3,126,321	+		MIT1002_02822	0.60	+1.2
3,126,374	-		MIT1002_02822	0.64	-0.1
3,126,464	+		MIT1002_02822	0.72	-0.8
3,126,520	+		MIT1002_02822	0.77	-0.4
3,126,607	+		MIT1002_02822	0.84	+0.1