Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02515

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
2,804,469	+		MIT1002_02514	0.13	-0.9
2,804,477	-		MIT1002_02514	0.14	+1.1
2,804,547	-		MIT1002_02514	0.21	+0.2
2,804,579	-		MIT1002_02514	0.24	+0.4
2,804,648	-		MIT1002_02514	0.31	+0.1
2,804,650	+		MIT1002_02514	0.31	+0.3
2,804,714	+		MIT1002_02514	0.37	-1.7
2,804,719	+		MIT1002_02514	0.38	+1.2
2,804,737	-		MIT1002_02514	0.40	-0.3
2,804,737	-		MIT1002_02514	0.40	+0.1
2,804,737	-		MIT1002_02514	0.40	+0.6
2,804,740	+		MIT1002_02514	0.40	+1.0
2,804,770	+		MIT1002_02514	0.43	+2.1
2,804,802	+		MIT1002_02514	0.46	+1.5
2,804,802	+		MIT1002_02514	0.46	-0.0
2,805,080	+		MIT1002_02514	0.73	+0.1
2,805,185	+		MIT1002_02514	0.84	+1.2
2,805,299	+				+1.8
2,805,309	+				+0.1
2,805,309	+				+0.8
2,805,317	-				+2.1
2,805,317	-				-0.7
2,805,317	-				+1.0
2,805,328	+				-0.5
2,805,336	-				+1.0
2,805,460	+				-0.8
2,805,506	-				+0.5
2,805,628	+		MIT1002_02515	0.19	+1.1
2,805,692	-		MIT1002_02515	0.26	-0.3
2,805,697	-		MIT1002_02515	0.27	+1.1
2,805,883	+		MIT1002_02515	0.47	-0.8
2,805,933	-		MIT1002_02515	0.52	+0.4
2,806,024	+		MIT1002_02515	0.62	-0.9
2,806,035	+		MIT1002_02515	0.63	+0.8
2,806,036	+		MIT1002_02515	0.63	+0.3
2,806,036	+		MIT1002_02515	0.63	-0.6
2,806,043	-		MIT1002_02515	0.64	+0.4
2,806,136	-		MIT1002_02515	0.74	+0.9
2,806,166	-		MIT1002_02515	0.77	+4.0
2,806,197	+		MIT1002_02515	0.81	+0.1
2,806,212	-		MIT1002_02515	0.82	+0.7
2,806,253	-		MIT1002_02515	0.87	+1.1
2,806,286	+				-2.2
2,806,432	+				-0.2
2,806,570	+		MIT1002_02516	0.37	-0.5
2,806,704	-		MIT1002_02516	0.65	-0.8
2,806,907	+				+0.5
2,807,018	+				-0.8
2,807,108	-		MIT1002_02517	0.14	-0.0
2,807,124	+		MIT1002_02517	0.16	-2.0
2,807,257	+		MIT1002_02517	0.26	+0.2
2,807,298	-		MIT1002_02517	0.30	-0.3
2,807,298	-		MIT1002_02517	0.30	-2.2
2,807,314	+		MIT1002_02517	0.31	-0.3