Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02403

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
2,683,293	+				+1.6
2,683,304	+				-2.4
2,683,311	-				+0.2
2,683,312	-				+1.4
2,683,313	-				-1.3
2,683,331	+				+0.7
2,683,339	-				-0.2
2,683,341	+				-0.6
2,683,341	+				+1.5
2,683,426	-		MIT1002_02402	0.14	-0.9
2,683,464	+		MIT1002_02402	0.18	+0.3
2,683,471	-		MIT1002_02402	0.19	+0.8
2,683,523	-		MIT1002_02402	0.25	+1.2
2,683,591	-		MIT1002_02402	0.33	-1.3
2,683,659	-		MIT1002_02402	0.41	+2.8
2,683,660	-		MIT1002_02402	0.41	+1.8
2,683,660	-		MIT1002_02402	0.41	+1.0
2,683,660	-		MIT1002_02402	0.41	-0.7
2,683,678	-		MIT1002_02402	0.43	+0.8
2,683,690	-		MIT1002_02402	0.45	-0.5
2,683,737	-		MIT1002_02402	0.50	+1.4
2,683,743	+		MIT1002_02402	0.51	+0.1
2,683,751	+		MIT1002_02402	0.52	+0.5
2,683,796	+		MIT1002_02402	0.57	+1.7
2,683,805	+		MIT1002_02402	0.58	+1.5
2,683,861	-		MIT1002_02402	0.65	-0.7
2,683,888	+		MIT1002_02402	0.68	+1.4
2,683,901	-		MIT1002_02402	0.69	+1.1
2,683,978	+		MIT1002_02402	0.79	-0.9
2,684,120	-				+2.2
2,684,128	-				+0.5
2,684,128	-				+1.2
2,684,208	+				-1.3
2,684,968	-				-0.8
2,685,003	+				-0.7
2,685,290	-		MIT1002_02404	0.38	-0.8
2,685,290	-		MIT1002_02404	0.38	-3.5
2,685,345	+		MIT1002_02404	0.43	-2.2
2,685,345	+		MIT1002_02404	0.43	-0.7
2,685,345	+		MIT1002_02404	0.43	-3.1
2,685,353	-		MIT1002_02404	0.44	-2.4
2,685,353	-		MIT1002_02404	0.44	-2.7
2,685,353	-		MIT1002_02404	0.44	-5.5
2,685,429	-		MIT1002_02404	0.52	-1.2
2,685,445	+		MIT1002_02404	0.54	-2.6
2,685,453	-		MIT1002_02404	0.55	-2.1
2,685,464	+		MIT1002_02404	0.56	-2.5
2,685,525	+		MIT1002_02404	0.62	-3.2
2,685,533	-		MIT1002_02404	0.63	-4.4
2,685,624	-		MIT1002_02404	0.73	-4.5
2,685,697	-		MIT1002_02404	0.80	-5.8
2,685,717	-		MIT1002_02404	0.82	-3.0
2,685,767	+		MIT1002_02404	0.88	-2.3
2,685,855	+				-3.2
2,685,863	-				-4.6
2,685,890	-				-2.3
2,685,896	-				-1.9
2,685,908	-				+1.1
2,685,908	-				-0.1