Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02379

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
2,656,382	-				-0.4
2,656,466	+		MIT1002_02379	0.25	-0.2
2,656,518	-		MIT1002_02379	0.37	-1.8
2,656,569	-		MIT1002_02379	0.48	-1.3
2,656,586	+		MIT1002_02379	0.52	+0.2
2,656,594	-		MIT1002_02379	0.54	+1.2
2,656,624	-		MIT1002_02379	0.60	-1.7
2,656,624	-		MIT1002_02379	0.60	+0.4
2,656,637	-		MIT1002_02379	0.63	+0.4
2,656,655	+		MIT1002_02379	0.67	-0.3
2,656,663	-		MIT1002_02379	0.69	-1.0
2,656,663	-		MIT1002_02379	0.69	-0.8
2,656,663	-		MIT1002_02379	0.69	-1.4
2,656,693	-		MIT1002_02379	0.75	+0.2
2,656,695	+		MIT1002_02379	0.76	+2.7
2,656,720	+		MIT1002_02379	0.81	-0.3
2,656,752	-		MIT1002_02379	0.89	+0.4
2,656,757	+		MIT1002_02379	0.90	+0.5
2,656,769	+				-0.1
2,656,842	-				+0.6
2,656,891	-				+0.2
2,656,901	-				+1.8
2,656,959	+				+0.5
2,656,959	+				-3.1
2,656,959	+				-0.1
2,656,959	+				+1.3
2,656,959	+				-1.6
2,656,959	+				-0.7
2,656,959	+				-0.3
2,656,967	-				-0.1
2,656,967	-				-3.9
2,656,967	-				-0.2
2,656,967	-				+0.5
2,656,967	-				-0.5
2,656,967	-				-0.3
2,656,967	-				+0.4
2,656,967	-				+0.4
2,656,967	-				-0.2
2,656,967	-				-1.3
2,656,967	-				+0.2
2,656,967	-				-2.7
2,656,967	-				+2.7
2,656,967	-				+0.5
2,656,969	+				-0.4
2,657,027	+				-1.3
2,657,076	-				+0.6
2,657,112	+		MIT1002_02380	0.11	-2.6
2,657,204	-		MIT1002_02380	0.15	+0.6
2,657,247	+		MIT1002_02380	0.17	-1.0
2,657,277	+		MIT1002_02380	0.18	-1.6
2,657,299	+		MIT1002_02380	0.20	-0.7
2,657,299	+		MIT1002_02380	0.20	-1.1
2,657,307	-		MIT1002_02380	0.20	-2.0
2,657,307	-		MIT1002_02380	0.20	-0.6
2,657,330	+		MIT1002_02380	0.21	-0.2
2,657,353	-		MIT1002_02380	0.22	+0.4
2,657,369	+		MIT1002_02380	0.23	-1.8
2,657,369	+		MIT1002_02380	0.23	-0.3
2,657,376	+		MIT1002_02380	0.23	+0.3
2,657,376	+		MIT1002_02380	0.23	-2.3
2,657,376	+		MIT1002_02380	0.23	+0.0
2,657,480	-		MIT1002_02380	0.28	-1.2
2,657,605	-		MIT1002_02380	0.34	+0.9
2,657,616	+		MIT1002_02380	0.35	+0.8
2,657,624	-		MIT1002_02380	0.35	+1.7
2,657,671	-		MIT1002_02380	0.37	+0.4
2,657,697	-		MIT1002_02380	0.39	+0.7
2,657,728	+		MIT1002_02380	0.40	-0.8
2,657,733	+		MIT1002_02380	0.40	+0.7
2,657,733	+		MIT1002_02380	0.40	-0.4
2,657,736	-		MIT1002_02380	0.40	-1.5
2,657,736	-		MIT1002_02380	0.40	+0.5