Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02266

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
2,522,135	-		MIT1002_02265	0.65	+0.1
2,522,162	-		MIT1002_02265	0.66	+0.1
2,522,165	-		MIT1002_02265	0.66	-0.0
2,522,206	+		MIT1002_02265	0.67	-1.4
2,522,214	-		MIT1002_02265	0.68	+1.0
2,522,223	+		MIT1002_02265	0.68	-1.2
2,522,231	+		MIT1002_02265	0.68	-0.5
2,522,246	-		MIT1002_02265	0.69	+0.2
2,522,248	+		MIT1002_02265	0.69	-0.2
2,522,256	-		MIT1002_02265	0.70	-1.7
2,522,256	-		MIT1002_02265	0.70	+1.3
2,522,256	-		MIT1002_02265	0.70	+0.8
2,522,284	-		MIT1002_02265	0.71	+1.3
2,522,344	-		MIT1002_02265	0.73	-1.6
2,522,344	-		MIT1002_02265	0.73	-0.7
2,522,369	+		MIT1002_02265	0.74	+0.3
2,522,371	+		MIT1002_02265	0.74	+1.7
2,522,371	+		MIT1002_02265	0.74	-3.0
2,522,379	-		MIT1002_02265	0.74	+1.4
2,522,379	-		MIT1002_02265	0.74	-0.6
2,522,381	+		MIT1002_02265	0.75	-0.5
2,522,440	+		MIT1002_02265	0.77	+0.1
2,522,440	+		MIT1002_02265	0.77	+1.2
2,522,448	-		MIT1002_02265	0.77	+0.2
2,522,448	-		MIT1002_02265	0.77	-0.5
2,522,495	+		MIT1002_02265	0.79	+2.1
2,522,540	-		MIT1002_02265	0.81	-0.3
2,522,602	+		MIT1002_02265	0.84	-0.0
2,522,610	-		MIT1002_02265	0.84	+0.8
2,522,706	-		MIT1002_02265	0.88	-0.1
2,522,708	-		MIT1002_02265	0.88	+0.9
2,522,763	+				-1.2
2,522,818	-				+1.2
2,522,871	+				+0.8
2,522,881	+				+0.5
2,522,881	+				-0.3
2,522,889	-				-0.4
2,523,118	+				-1.8
2,523,147	-				-3.6
2,523,156	+				-3.9
2,523,164	-				-1.2
2,523,176	-				-3.9
2,523,176	-				-2.3
2,523,176	-				-2.7
2,523,176	-				-3.6
2,523,205	-				-5.1
2,523,225	+				-1.9
2,523,233	-				-4.2
2,523,365	-		MIT1002_02266	0.20	-5.1
2,523,495	-		MIT1002_02266	0.30	-1.3
2,523,502	-		MIT1002_02266	0.31	-2.3
2,523,530	-		MIT1002_02266	0.33	-5.7
2,523,627	+		MIT1002_02266	0.41	-2.6
2,523,653	+		MIT1002_02266	0.43	-1.3
2,523,653	+		MIT1002_02266	0.43	-3.1
2,523,661	-		MIT1002_02266	0.44	-4.9
2,523,679	+		MIT1002_02266	0.45	-3.7
2,523,689	+		MIT1002_02266	0.46	-2.2
2,523,818	+		MIT1002_02266	0.56	-4.2
2,523,818	+		MIT1002_02266	0.56	-5.5
2,523,826	-		MIT1002_02266	0.57	-1.7
2,523,887	+		MIT1002_02266	0.62	-4.6
2,523,899	+		MIT1002_02266	0.63	-2.8
2,523,963	+		MIT1002_02266	0.68	-2.7
2,523,963	+		MIT1002_02266	0.68	-3.5
2,523,963	+		MIT1002_02266	0.68	-2.8
2,523,963	+		MIT1002_02266	0.68	-4.3
2,523,966	-		MIT1002_02266	0.68	-5.2
2,523,971	-		MIT1002_02266	0.69	-4.2
2,524,069	-		MIT1002_02266	0.77	-2.7
2,524,069	-		MIT1002_02266	0.77	-3.4
2,524,108	-		MIT1002_02266	0.80	-5.1
2,524,121	-		MIT1002_02266	0.81	-4.2
2,524,216	-		MIT1002_02266	0.88	-4.0
2,524,229	+		MIT1002_02266	0.89	-3.5
2,524,237	-				-3.2
2,524,279	+				-2.7
2,524,279	+				-2.4
2,524,279	+				-0.7
2,524,279	+				-2.2
2,524,287	-				-4.4
2,524,287	-				-3.6
2,524,296	+				-2.9
2,524,317	+				-5.4
2,524,330	-				-2.3
2,524,406	+				-2.2
2,524,406	+				-4.6
2,524,411	+				-2.2
2,524,411	+				-3.4
2,524,412	-				-1.5
2,524,412	-				-1.3
2,524,440	-				-3.2
2,524,450	-				-2.5
2,524,768	+		MIT1002_02267	0.49	-0.8
2,524,774	-		MIT1002_02267	0.50	+0.4
2,524,811	-		MIT1002_02267	0.56	+0.1
2,525,054	-				-1.7
2,525,067	+				+1.9
2,525,067	+				-0.9
2,525,067	+				+0.2
2,525,067	+				+0.0
2,525,113	-				+0.3
2,525,114	+				-0.7
2,525,159	+				+1.0
2,525,234	-				+1.7
2,525,234	-				+1.8
2,525,296	-				-0.7
2,525,324	+				+0.5