Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02224

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
2,484,719	-				-1.1
2,484,783	+				-1.5
2,484,907	-				-1.1
2,485,005	+		MIT1002_02223	0.10	+0.6
2,485,051	+		MIT1002_02223	0.17	+0.2
2,485,067	+		MIT1002_02223	0.19	-0.9
2,485,107	+		MIT1002_02223	0.25	-0.5
2,485,107	+		MIT1002_02223	0.25	-4.2
2,485,107	+		MIT1002_02223	0.25	+0.8
2,485,195	+		MIT1002_02223	0.37	+0.4
2,485,195	+		MIT1002_02223	0.37	-2.3
2,485,203	-		MIT1002_02223	0.38	-0.4
2,485,357	+		MIT1002_02223	0.60	+0.9
2,485,365	-		MIT1002_02223	0.61	+0.6
2,485,382	-		MIT1002_02223	0.63	-0.1
2,485,473	-		MIT1002_02223	0.76	+0.5
2,485,532	-		MIT1002_02223	0.84	+0.1
2,485,647	-				-1.3
2,485,758	+		MIT1002_02224	0.12	-0.3
2,485,761	-		MIT1002_02224	0.13	-2.1
2,485,761	-		MIT1002_02224	0.13	+0.0
2,485,823	-		MIT1002_02224	0.22	+1.6
2,485,823	-		MIT1002_02224	0.22	+0.7
2,485,873	-		MIT1002_02224	0.30	+0.9
2,485,962	+		MIT1002_02224	0.44	+1.0
2,485,964	+		MIT1002_02224	0.45	+0.8
2,486,023	+		MIT1002_02224	0.54	+0.1
2,486,048	+		MIT1002_02224	0.58	+0.3
2,486,051	+		MIT1002_02224	0.58	+0.0
2,486,051	+		MIT1002_02224	0.58	+1.3
2,486,116	-		MIT1002_02224	0.69	+1.4
2,486,158	+		MIT1002_02224	0.75	+0.7
2,486,165	+		MIT1002_02224	0.76	+0.5
2,486,165	+		MIT1002_02224	0.76	+2.0
2,486,173	-		MIT1002_02224	0.78	+0.6
2,486,173	-		MIT1002_02224	0.78	+2.0
2,486,262	+				-0.1
2,486,270	-				-0.2
2,486,270	-				+1.1
2,486,483	-				-0.3
2,486,553	+				-2.1
2,486,585	-		MIT1002_02225	0.13	-1.7
2,486,628	-		MIT1002_02225	0.19	-0.9
2,486,757	+		MIT1002_02225	0.37	-0.9
2,486,792	+		MIT1002_02225	0.41	+0.0
2,486,792	+		MIT1002_02225	0.41	-3.6
2,486,797	+		MIT1002_02225	0.42	-0.4
2,486,799	+		MIT1002_02225	0.42	-1.4
2,486,800	-		MIT1002_02225	0.42	-0.5
2,486,805	-		MIT1002_02225	0.43	-3.5
2,486,835	+		MIT1002_02225	0.47	-0.2
2,486,946	+		MIT1002_02225	0.62	-1.4
2,486,954	-		MIT1002_02225	0.64	+1.2
2,486,954	-		MIT1002_02225	0.64	+0.8
2,486,954	-		MIT1002_02225	0.64	-0.5
2,486,955	-		MIT1002_02225	0.64	-0.4
2,486,991	+		MIT1002_02225	0.69	-1.6
2,486,991	+		MIT1002_02225	0.69	-0.4
2,486,991	+		MIT1002_02225	0.69	-2.9
2,486,991	+		MIT1002_02225	0.69	-2.5
2,487,060	-		MIT1002_02225	0.78	-3.6
2,487,109	+		MIT1002_02225	0.85	+0.1
2,487,117	+		MIT1002_02225	0.86	-1.4
2,487,127	+		MIT1002_02225	0.87	+1.6
2,487,203	-				-0.4
2,487,270	-				-1.8