Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01992

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
2,226,449	-		MIT1002_01991	0.19	+0.4
2,226,449	-		MIT1002_01991	0.19	-1.2
2,226,449	-		MIT1002_01991	0.19	-1.4
2,226,449	-		MIT1002_01991	0.19	-0.8
2,226,476	-		MIT1002_01991	0.21	+0.4
2,226,484	+		MIT1002_01991	0.22	-1.5
2,226,485	+		MIT1002_01991	0.22	-0.6
2,226,495	+		MIT1002_01991	0.23	-1.1
2,226,495	+		MIT1002_01991	0.23	+0.2
2,226,503	-		MIT1002_01991	0.24	-1.5
2,226,517	-		MIT1002_01991	0.25	-0.8
2,226,638	-		MIT1002_01991	0.37	+1.1
2,226,647	-		MIT1002_01991	0.38	-1.4
2,226,784	+		MIT1002_01991	0.52	-1.3
2,226,855	-		MIT1002_01991	0.59	-0.4
2,226,914	+		MIT1002_01991	0.65	+0.3
2,226,983	+		MIT1002_01991	0.72	-0.3
2,227,023	-		MIT1002_01991	0.76	-0.5
2,227,055	-		MIT1002_01991	0.79	+0.1
2,227,057	+		MIT1002_01991	0.79	+1.5
2,227,057	+		MIT1002_01991	0.79	+1.6
2,227,062	+		MIT1002_01991	0.80	-1.0
2,227,065	-		MIT1002_01991	0.80	+0.6
2,227,065	-		MIT1002_01991	0.80	-2.9
2,227,065	-		MIT1002_01991	0.80	-1.2
2,227,070	-		MIT1002_01991	0.80	+0.2
2,227,136	-		MIT1002_01991	0.87	-1.2
2,227,136	-		MIT1002_01991	0.87	-0.2
2,227,221	-				-0.1
2,227,264	-				+1.0
2,227,288	+				-0.3
2,227,288	+				-0.0
2,227,307	+				-2.3
2,227,315	-				-0.7
2,227,317	+				-0.7
2,227,330	-				-0.5
2,227,492	+				+0.7
2,227,492	+				-1.4
2,227,492	+				-1.8
2,227,500	-				-0.5
2,227,500	-				+0.3
2,227,500	-				-1.2
2,227,500	-				+0.3
2,227,500	-				-0.7
2,227,527	+				+0.2
2,227,527	+				+0.9
2,227,620	-		MIT1002_01992	0.21	+0.1
2,227,692	-		MIT1002_01992	0.30	+1.4
2,227,711	+		MIT1002_01992	0.32	-1.1
2,227,711	+		MIT1002_01992	0.32	-1.0
2,228,089	+		MIT1002_01992	0.77	-2.1
2,228,222	+				+1.0
2,228,230	+				-0.9
2,228,402	-				-0.4
2,228,402	-				+1.9
2,228,402	-				-0.5
2,228,493	+				-1.4
2,228,583	-		MIT1002_01993	0.13	+0.8
2,228,592	+		MIT1002_01993	0.14	-1.7
2,228,603	+		MIT1002_01993	0.14	+0.5
2,228,650	+		MIT1002_01993	0.17	-0.4
2,228,658	-		MIT1002_01993	0.18	+0.3
2,228,658	-		MIT1002_01993	0.18	+2.5
2,228,676	+		MIT1002_01993	0.19	-0.3
2,228,721	+		MIT1002_01993	0.22	-0.2
2,228,721	+		MIT1002_01993	0.22	+2.6
2,228,772	+		MIT1002_01993	0.25	+1.6
2,228,802	-		MIT1002_01993	0.27	+1.5
2,228,802	-		MIT1002_01993	0.27	+0.7
2,228,865	+		MIT1002_01993	0.30	-1.9
2,229,209	+		MIT1002_01993	0.51	+1.5
2,229,216	+		MIT1002_01993	0.52	+1.3
2,229,223	-		MIT1002_01993	0.52	+0.1