Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01690

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
1,878,005	-				+0.5
1,878,019	-				+0.5
1,878,032	-				-1.1
1,878,120	-		MIT1002_01689	0.16	-1.5
1,878,158	-		MIT1002_01689	0.20	-0.7
1,878,171	+		MIT1002_01689	0.21	+0.2
1,878,183	+		MIT1002_01689	0.22	+0.4
1,878,255	+		MIT1002_01689	0.30	+0.4
1,878,262	+		MIT1002_01689	0.30	-1.7
1,878,270	-		MIT1002_01689	0.31	-2.0
1,878,288	+		MIT1002_01689	0.33	+0.6
1,878,289	+		MIT1002_01689	0.33	-1.9
1,878,297	-		MIT1002_01689	0.34	+0.8
1,878,297	-		MIT1002_01689	0.34	+1.0
1,878,326	+		MIT1002_01689	0.37	-0.2
1,878,417	+		MIT1002_01689	0.46	+0.7
1,878,417	+		MIT1002_01689	0.46	+0.4
1,878,417	+		MIT1002_01689	0.46	+1.2
1,878,417	+		MIT1002_01689	0.46	-3.4
1,878,417	+		MIT1002_01689	0.46	+0.3
1,878,417	+		MIT1002_01689	0.46	+1.0
1,878,417	+		MIT1002_01689	0.46	+0.6
1,878,417	+		MIT1002_01689	0.46	+0.6
1,878,417	+		MIT1002_01689	0.46	+0.5
1,878,425	-		MIT1002_01689	0.47	-3.0
1,878,425	-		MIT1002_01689	0.47	+1.1
1,878,425	-		MIT1002_01689	0.47	-0.2
1,878,455	+		MIT1002_01689	0.50	+0.8
1,878,455	+		MIT1002_01689	0.50	-0.6
1,878,455	+		MIT1002_01689	0.50	-0.7
1,878,455	+		MIT1002_01689	0.50	+0.9
1,878,463	-		MIT1002_01689	0.51	+0.8
1,878,463	-		MIT1002_01689	0.51	+1.3
1,878,612	+		MIT1002_01689	0.66	-0.2
1,878,630	-		MIT1002_01689	0.68	+0.2
1,878,690	+		MIT1002_01689	0.74	+2.8
1,878,743	+		MIT1002_01689	0.79	-0.5
1,878,806	+		MIT1002_01689	0.86	+1.2
1,878,821	+		MIT1002_01689	0.87	+1.7
1,878,845	-		MIT1002_01689	0.90	+0.6
1,878,862	+				+0.5
1,878,867	+				+1.4
1,878,867	+				+0.5
1,878,887	+				+1.0
1,878,909	+				+1.2
1,878,927	-				-0.3
1,878,932	-				-1.0
1,879,137	+		MIT1002_01690	0.36	-1.5
1,879,162	+		MIT1002_01690	0.42	+0.3
1,879,182	+		MIT1002_01690	0.46	+2.0
1,879,240	+		MIT1002_01690	0.58	-0.9
1,879,261	-		MIT1002_01690	0.63	+0.3
1,879,307	-		MIT1002_01690	0.72	+0.0
1,879,307	-		MIT1002_01690	0.72	-0.4
1,879,326	+		MIT1002_01690	0.76	+1.7
1,879,328	-		MIT1002_01690	0.77	+0.4
1,879,358	+		MIT1002_01690	0.83	-1.8
1,879,363	+		MIT1002_01690	0.84	+1.3
1,879,372	-		MIT1002_01690	0.86	+0.4
1,879,379	+		MIT1002_01690	0.88	-2.8
1,879,379	+		MIT1002_01690	0.88	-0.7
1,879,379	+		MIT1002_01690	0.88	+0.4
1,879,379	+		MIT1002_01690	0.88	-0.6
1,879,379	+		MIT1002_01690	0.88	-0.3
1,879,387	-		MIT1002_01690	0.89	-0.2
1,879,498	+				+0.3
1,880,253	+				+0.5
1,880,257	-				-2.3
1,880,418	-				-2.8