Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01661

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
1,833,609	-				+0.3
1,833,609	-				+1.0
1,833,680	+				-0.2
1,833,752	-				-0.6
1,833,759	+				-1.4
1,833,789	+		MIT1002_01660	0.12	+0.7
1,833,823	-		MIT1002_01660	0.17	+1.1
1,833,892	+		MIT1002_01660	0.25	-0.6
1,833,906	+		MIT1002_01660	0.27	-0.3
1,833,942	-		MIT1002_01660	0.31	-2.6
1,833,972	+		MIT1002_01660	0.35	-0.6
1,833,972	+		MIT1002_01660	0.35	-0.0
1,833,980	-		MIT1002_01660	0.36	+1.6
1,833,980	-		MIT1002_01660	0.36	-0.9
1,833,980	-		MIT1002_01660	0.36	+0.6
1,834,007	+		MIT1002_01660	0.39	-0.7
1,834,115	+		MIT1002_01660	0.53	-2.7
1,834,118	-		MIT1002_01660	0.53	-1.6
1,834,213	-		MIT1002_01660	0.65	+0.0
1,834,278	-		MIT1002_01660	0.73	-0.5
1,834,302	+		MIT1002_01660	0.76	+0.7
1,834,310	-		MIT1002_01660	0.77	-1.6
1,834,337	+		MIT1002_01660	0.80	-1.5
1,834,422	-				-0.0
1,834,427	+				+0.4
1,834,436	+				-1.3
1,834,436	+				-0.9
1,834,444	-				-0.8
1,834,454	+				+0.6
1,834,462	-				-0.1
1,834,464	+				-0.7
1,834,469	+				+0.4
1,834,469	+				-0.6
1,834,477	-				+0.1
1,834,477	-				+0.1
1,834,501	+				-0.2
1,834,568	+				-1.1
1,834,609	-				+1.4
1,834,670	+				-0.3
1,834,670	+				-0.1
1,834,841	+		MIT1002_01661	0.21	-0.8
1,834,859	-		MIT1002_01661	0.22	-0.4
1,834,920	-		MIT1002_01661	0.27	-0.4
1,834,945	+		MIT1002_01661	0.29	+0.0
1,834,981	+		MIT1002_01661	0.32	+2.2
1,835,057	-		MIT1002_01661	0.38	+0.1
1,835,101	+		MIT1002_01661	0.41	-0.8
1,835,101	+		MIT1002_01661	0.41	-0.4
1,835,109	-		MIT1002_01661	0.42	-0.3
1,835,109	-		MIT1002_01661	0.42	-0.2
1,835,235	+		MIT1002_01661	0.52	-0.3
1,835,243	-		MIT1002_01661	0.52	-0.9
1,835,243	-		MIT1002_01661	0.52	-0.4
1,835,289	+		MIT1002_01661	0.56	+1.4
1,835,413	-		MIT1002_01661	0.66	-0.3
1,835,422	+		MIT1002_01661	0.66	+0.7
1,835,431	-		MIT1002_01661	0.67	-1.5
1,835,431	-		MIT1002_01661	0.67	-1.3
1,835,435	+		MIT1002_01661	0.67	-0.2
1,835,437	+		MIT1002_01661	0.67	-1.0
1,835,445	-		MIT1002_01661	0.68	+0.1
1,835,489	-		MIT1002_01661	0.71	+0.6
1,835,772	+				-0.9
1,835,772	+				+0.1
1,835,772	+				-1.1
1,835,780	-				-0.7
1,835,780	-				-2.3
1,835,780	-				-2.5
1,835,780	-				+0.5
1,835,788	-				-0.4
1,835,800	-				-0.3
1,835,941	+				-1.6
1,835,949	-				-0.7
1,835,949	-				+0.3
1,835,949	-				-0.0
1,835,954	-				+0.6
1,835,954	-				+1.8
1,836,077	+				+0.9
1,836,085	-				+1.0
1,836,177	+				-3.0
1,836,291	+				-0.4
1,836,311	+				-0.8
1,836,319	-				+2.0
1,836,319	-				-0.6
1,836,444	+				+2.0
1,836,537	+				-0.3
1,836,596	-				-2.1
1,836,607	+				-0.9
1,836,741	+		MIT1002_01662	0.34	-0.0
1,836,778	+		MIT1002_01662	0.40	-0.6
1,836,793	+		MIT1002_01662	0.43	+0.2
1,836,803	+		MIT1002_01662	0.45	-2.8