Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01655

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
1,827,309	+		MIT1002_01653	0.73	-0.2
1,827,317	-		MIT1002_01653	0.74	-0.8
1,827,317	-		MIT1002_01653	0.74	+1.4
1,827,317	-		MIT1002_01653	0.74	-1.1
1,827,326	+		MIT1002_01653	0.76	-0.2
1,827,334	-		MIT1002_01653	0.77	-0.1
1,827,361	+		MIT1002_01653	0.81	+0.7
1,827,387	+		MIT1002_01653	0.84	+0.7
1,827,396	-		MIT1002_01653	0.85	-0.0
1,827,456	-				+0.4
1,827,460	+				-1.4
1,827,502	+				+1.0
1,827,502	+				+0.1
1,827,502	+				-0.3
1,827,502	+				-2.0
1,827,509	+				+0.1
1,827,511	-				-0.6
1,827,555	-				-0.4
1,827,555	-				-0.3
1,827,567	-				-1.6
1,827,832	+				+0.1
1,827,883	+		MIT1002_01654	0.16	-1.4
1,827,886	-		MIT1002_01654	0.17	-1.1
1,827,891	-		MIT1002_01654	0.18	-1.6
1,827,901	+		MIT1002_01654	0.21	+2.0
1,827,945	+		MIT1002_01654	0.32	+0.2
1,827,945	+		MIT1002_01654	0.32	-4.9
1,827,945	+		MIT1002_01654	0.32	+2.3
1,827,945	+		MIT1002_01654	0.32	-1.6
1,827,945	+		MIT1002_01654	0.32	-1.2
1,827,953	-		MIT1002_01654	0.34	-2.4
1,827,953	-		MIT1002_01654	0.34	+0.3
1,827,953	-		MIT1002_01654	0.34	-0.4
1,827,953	-		MIT1002_01654	0.34	+2.0
1,827,953	-		MIT1002_01654	0.34	-0.1
1,828,079	+		MIT1002_01654	0.66	+0.4
1,828,139	+		MIT1002_01654	0.81	-0.3
1,828,156	+		MIT1002_01654	0.85	+1.2
1,828,158	+		MIT1002_01654	0.86	-0.4
1,828,192	+				-3.0
1,828,219	+				+1.5
1,828,219	+				+0.6
1,828,219	+				+0.5
1,828,220	+				+0.1
1,828,228	-				+0.1
1,828,286	-		MIT1002_01655	0.14	-0.5
1,828,380	-		MIT1002_01655	0.38	+0.1
1,828,388	+		MIT1002_01655	0.40	+1.2
1,828,414	+		MIT1002_01655	0.47	-2.7
1,828,507	-		MIT1002_01655	0.70	-1.9
1,828,562	+		MIT1002_01655	0.84	-0.2
1,828,562	+		MIT1002_01655	0.84	-1.2
1,828,567	+		MIT1002_01655	0.85	-1.9
1,828,681	-				+0.4
1,828,732	+				+0.2
1,828,763	-				+1.0
1,828,763	-				+0.8
1,828,881	-		MIT1002_01656	0.18	+0.2
1,828,894	+		MIT1002_01656	0.19	-3.5
1,828,943	-		MIT1002_01656	0.23	-0.6
1,828,959	+		MIT1002_01656	0.24	+0.2
1,828,967	-		MIT1002_01656	0.25	-0.8
1,829,047	+		MIT1002_01656	0.31	+0.2
1,829,052	+		MIT1002_01656	0.32	+0.1
1,829,052	+		MIT1002_01656	0.32	+0.3
1,829,060	-		MIT1002_01656	0.32	+0.9
1,829,060	-		MIT1002_01656	0.32	+1.3
1,829,060	-		MIT1002_01656	0.32	+0.2
1,829,103	+		MIT1002_01656	0.36	-0.1
1,829,111	+		MIT1002_01656	0.36	+0.4
1,829,132	-		MIT1002_01656	0.38	-1.0
1,829,220	+		MIT1002_01656	0.45	-1.1
1,829,259	-		MIT1002_01656	0.48	-0.8
1,829,378	-		MIT1002_01656	0.57	-2.0
1,829,428	-		MIT1002_01656	0.61	+1.0
1,829,486	-		MIT1002_01656	0.65	+0.2
1,829,528	+		MIT1002_01656	0.68	-0.7
1,829,552	-		MIT1002_01656	0.70	-1.8
1,829,560	-		MIT1002_01656	0.71	-0.9