Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01626

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
1,791,032	-		MIT1002_01625	0.32	-0.5
1,791,069	+		MIT1002_01625	0.34	-0.6
1,791,082	-		MIT1002_01625	0.35	+0.4
1,791,124	+		MIT1002_01625	0.38	+0.6
1,791,189	-		MIT1002_01625	0.43	+1.8
1,791,192	+		MIT1002_01625	0.43	-0.8
1,791,228	+		MIT1002_01625	0.45	+1.8
1,791,287	-		MIT1002_01625	0.49	+0.3
1,791,318	+		MIT1002_01625	0.52	+0.5
1,791,326	+		MIT1002_01625	0.52	+0.2
1,791,326	-		MIT1002_01625	0.52	+0.1
1,791,331	+		MIT1002_01625	0.52	-2.8
1,791,334	-		MIT1002_01625	0.53	+2.3
1,791,339	-		MIT1002_01625	0.53	+1.0
1,791,339	-		MIT1002_01625	0.53	+0.2
1,791,437	-		MIT1002_01625	0.60	-0.5
1,791,453	+		MIT1002_01625	0.61	+1.3
1,791,521	+		MIT1002_01625	0.66	-1.1
1,791,528	+		MIT1002_01625	0.66	+0.5
1,791,529	-		MIT1002_01625	0.66	+1.0
1,791,536	-		MIT1002_01625	0.67	+2.2
1,791,587	+		MIT1002_01625	0.70	-1.1
1,791,595	-		MIT1002_01625	0.71	+0.9
1,791,616	+		MIT1002_01625	0.72	-0.6
1,791,616	+		MIT1002_01625	0.72	+0.1
1,791,616	+		MIT1002_01625	0.72	+0.7
1,791,616	+		MIT1002_01625	0.72	+0.4
1,791,622	+		MIT1002_01625	0.73	+0.4
1,791,622	+		MIT1002_01625	0.73	+1.1
1,791,624	-		MIT1002_01625	0.73	+0.5
1,791,624	-		MIT1002_01625	0.73	-0.6
1,791,640	-		MIT1002_01625	0.74	-0.3
1,791,640	-		MIT1002_01625	0.74	-0.9
1,791,672	-		MIT1002_01625	0.76	+0.1
1,791,703	+		MIT1002_01625	0.79	+0.6
1,791,744	+		MIT1002_01625	0.81	+1.0
1,791,753	-		MIT1002_01625	0.82	+1.1
1,791,753	-		MIT1002_01625	0.82	+0.7
1,791,753	-		MIT1002_01625	0.82	+1.3
1,791,753	-		MIT1002_01625	0.82	+1.9
1,791,779	+		MIT1002_01625	0.84	+1.0
1,791,817	-		MIT1002_01625	0.87	+1.1
1,791,823	+		MIT1002_01625	0.87	+0.3
1,791,826	-		MIT1002_01625	0.87	-0.1
1,791,836	-		MIT1002_01625	0.88	+0.2
1,791,880	+				+1.3
1,791,880	+				-1.5
1,791,891	+				-0.9
1,791,910	+				+1.2
1,791,918	+				+1.6
1,791,921	-				-2.4
1,791,921	-				-1.9
1,791,921	-				+1.3
1,791,924	+				+1.7
1,791,925	+				+0.1
1,791,925	+				-0.2
1,791,933	-				+0.8
1,791,934	-				+0.1
1,791,992	+				+0.9
1,792,105	+				+0.8
1,792,105	+				-2.4
1,792,105	+				+1.5
1,792,105	+				-0.2
1,792,105	+				+0.7
1,792,105	+				-0.6
1,792,113	-				+0.8
1,792,113	-				+0.7
1,792,113	-				+0.4
1,792,113	-				-1.0
1,792,113	-				-0.8
1,792,113	-				+0.1
1,792,113	-				-0.0
1,792,113	-				+0.4
1,792,118	+				-0.7
1,792,119	-				+0.2
1,792,126	-				-2.8
1,792,132	+		MIT1002_01626	0.10	+0.0
1,792,133	+		MIT1002_01626	0.10	+0.4
1,792,141	-		MIT1002_01626	0.11	+3.3
1,792,150	-		MIT1002_01626	0.12	+0.5
1,792,150	-		MIT1002_01626	0.12	+0.0
1,792,159	+		MIT1002_01626	0.12	-0.5
1,792,166	+		MIT1002_01626	0.13	+0.2
1,792,166	+		MIT1002_01626	0.13	+1.3
1,792,166	+		MIT1002_01626	0.13	-0.6
1,792,174	-		MIT1002_01626	0.13	-0.1
1,792,187	+		MIT1002_01626	0.15	+0.7
1,792,187	+		MIT1002_01626	0.15	+1.1
1,792,187	+		MIT1002_01626	0.15	+0.0
1,792,187	+		MIT1002_01626	0.15	-2.0
1,792,187	+		MIT1002_01626	0.15	+1.2
1,792,187	+		MIT1002_01626	0.15	+0.3
1,792,187	+		MIT1002_01626	0.15	-2.4
1,792,195	-		MIT1002_01626	0.15	-1.5
1,792,195	-		MIT1002_01626	0.15	-0.4
1,792,195	-		MIT1002_01626	0.15	-0.3
1,792,195	-		MIT1002_01626	0.15	-0.6
1,792,195	-		MIT1002_01626	0.15	-3.1
1,792,195	-		MIT1002_01626	0.15	+0.1
1,792,195	-		MIT1002_01626	0.15	-3.1
1,792,195	-		MIT1002_01626	0.15	+0.1
1,792,195	-		MIT1002_01626	0.15	+0.7
1,792,198	+		MIT1002_01626	0.15	+2.8
1,792,203	+		MIT1002_01626	0.16	-2.8
1,792,203	+		MIT1002_01626	0.16	+0.6
1,792,206	-		MIT1002_01626	0.16	+0.3
1,792,210	+		MIT1002_01626	0.16	-1.6
1,792,210	+		MIT1002_01626	0.16	-0.9
1,792,218	-		MIT1002_01626	0.17	+1.3
1,792,223	-		MIT1002_01626	0.17	+0.1
1,792,245	-		MIT1002_01626	0.19	+0.4
1,792,256	+		MIT1002_01626	0.20	-1.5
1,792,256	+		MIT1002_01626	0.20	+0.3
1,792,258	+		MIT1002_01626	0.20	-0.1
1,792,264	-		MIT1002_01626	0.21	+1.7
1,792,264	-		MIT1002_01626	0.21	+0.0
1,792,265	-		MIT1002_01626	0.21	+0.7
1,792,265	-		MIT1002_01626	0.21	+0.7
1,792,276	-		MIT1002_01626	0.22	+0.1
1,792,276	-		MIT1002_01626	0.22	-1.7
1,792,282	+		MIT1002_01626	0.22	-1.0
1,792,282	+		MIT1002_01626	0.22	+0.3
1,792,282	+		MIT1002_01626	0.22	-4.1
1,792,282	+		MIT1002_01626	0.22	+0.5
1,792,282	+		MIT1002_01626	0.22	-0.2
1,792,282	+		MIT1002_01626	0.22	-0.6
1,792,282	+		MIT1002_01626	0.22	+0.8
1,792,282	+		MIT1002_01626	0.22	+0.8
1,792,290	-		MIT1002_01626	0.23	+0.7
1,792,290	-		MIT1002_01626	0.23	+1.5
1,792,290	-		MIT1002_01626	0.23	-1.4
1,792,290	-		MIT1002_01626	0.23	+1.3
1,792,290	-		MIT1002_01626	0.23	+0.1
1,792,290	-		MIT1002_01626	0.23	-2.2
1,792,290	-		MIT1002_01626	0.23	-2.8
1,792,344	+		MIT1002_01626	0.27	+2.1
1,792,344	+		MIT1002_01626	0.27	-1.3
1,792,344	+		MIT1002_01626	0.27	+0.4
1,792,349	+		MIT1002_01626	0.28	-1.5
1,792,352	-		MIT1002_01626	0.28	+0.2
1,792,352	-		MIT1002_01626	0.28	+1.7
1,792,382	+		MIT1002_01626	0.30	+0.0
1,792,442	+		MIT1002_01626	0.35	+1.1
1,792,442	+		MIT1002_01626	0.35	+0.8
1,792,447	+		MIT1002_01626	0.36	-0.4
1,792,450	-		MIT1002_01626	0.36	-3.4
1,792,450	-		MIT1002_01626	0.36	-0.2
1,792,450	-		MIT1002_01626	0.36	+1.3
1,792,460	-		MIT1002_01626	0.37	+0.1
1,792,516	+		MIT1002_01626	0.41	-1.3
1,792,560	-		MIT1002_01626	0.45	+0.4
1,792,563	+		MIT1002_01626	0.45	+0.1
1,792,571	-		MIT1002_01626	0.46	-0.1
1,792,571	-		MIT1002_01626	0.46	-0.4
1,792,572	+		MIT1002_01626	0.46	-0.1
1,792,586	-		MIT1002_01626	0.47	-0.7
1,792,598	+		MIT1002_01626	0.48	+1.2
1,792,600	+		MIT1002_01626	0.48	+1.1
1,792,600	+		MIT1002_01626	0.48	-0.5
1,792,600	+		MIT1002_01626	0.48	+0.9
1,792,600	+		MIT1002_01626	0.48	-0.6
1,792,600	+		MIT1002_01626	0.48	-0.2
1,792,600	+		MIT1002_01626	0.48	+1.9
1,792,600	+		MIT1002_01626	0.48	-0.7
1,792,600	+		MIT1002_01626	0.48	+0.8
1,792,600	+		MIT1002_01626	0.48	-0.2
1,792,600	+		MIT1002_01626	0.48	+2.3
1,792,600	+		MIT1002_01626	0.48	+0.2
1,792,600	+		MIT1002_01626	0.48	+1.7
1,792,600	+		MIT1002_01626	0.48	-0.8
1,792,600	+		MIT1002_01626	0.48	+2.7
1,792,600	+		MIT1002_01626	0.48	+1.0
1,792,600	+		MIT1002_01626	0.48	-0.0
1,792,600	+		MIT1002_01626	0.48	+2.8
1,792,600	+		MIT1002_01626	0.48	+0.8
1,792,600	+		MIT1002_01626	0.48	+0.1
1,792,600	+		MIT1002_01626	0.48	+1.6
1,792,600	+		MIT1002_01626	0.48	-0.1
1,792,600	+		MIT1002_01626	0.48	-1.8
1,792,606	+		MIT1002_01626	0.49	+0.7
1,792,606	-		MIT1002_01626	0.49	+1.8
1,792,606	-		MIT1002_01626	0.49	+0.5
1,792,608	-		MIT1002_01626	0.49	+0.5
1,792,608	-		MIT1002_01626	0.49	+1.3
1,792,608	-		MIT1002_01626	0.49	+0.5
1,792,608	-		MIT1002_01626	0.49	-0.0
1,792,608	-		MIT1002_01626	0.49	+0.8
1,792,608	-		MIT1002_01626	0.49	+1.3
1,792,608	-		MIT1002_01626	0.49	+0.7
1,792,608	-		MIT1002_01626	0.49	+0.3
1,792,608	-		MIT1002_01626	0.49	-0.3
1,792,608	-		MIT1002_01626	0.49	-0.3
1,792,608	-		MIT1002_01626	0.49	+1.3
1,792,608	-		MIT1002_01626	0.49	-0.4
1,792,608	-		MIT1002_01626	0.49	-0.8
1,792,608	-		MIT1002_01626	0.49	+0.7
1,792,608	-		MIT1002_01626	0.49	+0.6
1,792,608	-		MIT1002_01626	0.49	-0.9
1,792,608	-		MIT1002_01626	0.49	+0.4
1,792,608	-		MIT1002_01626	0.49	-1.0
1,792,608	-		MIT1002_01626	0.49	-0.3
1,792,608	-		MIT1002_01626	0.49	-1.1
1,792,608	-		MIT1002_01626	0.49	-0.3
1,792,608	-		MIT1002_01626	0.49	+0.5
1,792,608	-		MIT1002_01626	0.49	+1.0
1,792,622	+		MIT1002_01626	0.50	+1.0
1,792,622	+		MIT1002_01626	0.50	-0.6
1,792,630	-		MIT1002_01626	0.51	-0.3
1,792,632	+		MIT1002_01626	0.51	-0.2
1,792,632	+		MIT1002_01626	0.51	-1.8
1,792,632	+		MIT1002_01626	0.51	+0.2
1,792,632	+		MIT1002_01626	0.51	+0.3
1,792,637	+		MIT1002_01626	0.51	-0.3
1,792,640	-		MIT1002_01626	0.51	+1.7
1,792,640	-		MIT1002_01626	0.51	-0.5
1,792,640	-		MIT1002_01626	0.51	-0.6
1,792,640	-		MIT1002_01626	0.51	-0.3
1,792,642	+		MIT1002_01626	0.52	+0.4
1,792,642	+		MIT1002_01626	0.52	+0.9
1,792,642	+		MIT1002_01626	0.52	+0.7
1,792,650	-		MIT1002_01626	0.52	+0.0
1,792,650	-		MIT1002_01626	0.52	+0.4
1,792,688	-		MIT1002_01626	0.55	+0.5
1,792,755	+		MIT1002_01626	0.61	+1.2
1,792,755	+		MIT1002_01626	0.61	-0.4
1,792,755	+		MIT1002_01626	0.61	+0.8
1,792,755	+		MIT1002_01626	0.61	+1.4
1,792,755	+		MIT1002_01626	0.61	-1.1
1,792,755	+		MIT1002_01626	0.61	-0.5
1,792,763	-		MIT1002_01626	0.61	+0.7
1,792,763	-		MIT1002_01626	0.61	-1.1
1,792,763	-		MIT1002_01626	0.61	+0.3
1,792,763	-		MIT1002_01626	0.61	+1.0
1,792,763	-		MIT1002_01626	0.61	+0.6
1,792,763	-		MIT1002_01626	0.61	+2.2
1,792,763	-		MIT1002_01626	0.61	+2.3
1,792,765	+		MIT1002_01626	0.62	+0.4
1,792,765	+		MIT1002_01626	0.62	-2.4
1,792,765	+		MIT1002_01626	0.62	+0.8
1,792,765	+		MIT1002_01626	0.62	-0.9
1,792,765	+		MIT1002_01626	0.62	-0.9
1,792,773	-		MIT1002_01626	0.62	+0.2
1,792,773	-		MIT1002_01626	0.62	+1.7
1,792,773	-		MIT1002_01626	0.62	+3.4
1,792,773	-		MIT1002_01626	0.62	+0.3
1,792,775	-		MIT1002_01626	0.62	-2.0
1,792,781	-		MIT1002_01626	0.63	+1.7
1,792,801	+		MIT1002_01626	0.64	-0.5
1,792,801	+		MIT1002_01626	0.64	-0.3
1,792,839	+		MIT1002_01626	0.68	-0.6
1,792,849	+		MIT1002_01626	0.68	-0.7
1,792,862	+		MIT1002_01626	0.69	-0.1
1,792,870	-		MIT1002_01626	0.70	+0.1
1,792,877	+		MIT1002_01626	0.71	+0.6
1,792,877	+		MIT1002_01626	0.71	-2.6
1,792,877	-		MIT1002_01626	0.71	+1.5
1,792,955	+		MIT1002_01626	0.77	+0.1
1,793,004	+		MIT1002_01626	0.81	-2.3
1,793,012	+		MIT1002_01626	0.82	+0.7
1,793,012	+		MIT1002_01626	0.82	+0.1
1,793,012	-		MIT1002_01626	0.82	+0.9
1,793,020	-		MIT1002_01626	0.82	-0.2
1,793,020	-		MIT1002_01626	0.82	-0.8
1,793,027	-		MIT1002_01626	0.83	+2.0
1,793,029	-		MIT1002_01626	0.83	+2.4
1,793,092	-		MIT1002_01626	0.88	-0.4
1,793,159	+				-0.1
1,793,193	+				-0.6
1,793,273	-				-1.1
1,793,309	+				-0.1
1,793,326	-				-0.9
1,793,331	+				-0.3
1,793,341	-				+3.2
1,793,345	+				+0.6
1,793,346	-				-2.6
1,793,346	-				-0.6
1,793,358	-				+0.1
1,793,383	-		MIT1002_01627	0.11	+0.1
1,793,420	+		MIT1002_01627	0.14	+0.0
1,793,493	+		MIT1002_01627	0.20	+0.4
1,793,504	+		MIT1002_01627	0.21	-1.2
1,793,516	+		MIT1002_01627	0.22	-0.1
1,793,627	+		MIT1002_01627	0.31	+1.5
1,793,627	+		MIT1002_01627	0.31	-2.2
1,793,627	+		MIT1002_01627	0.31	-2.1
1,793,627	+		MIT1002_01627	0.31	+0.4
1,793,627	+		MIT1002_01627	0.31	-1.7
1,793,627	+		MIT1002_01627	0.31	-0.4
1,793,627	+		MIT1002_01627	0.31	+0.3
1,793,627	+		MIT1002_01627	0.31	+1.4
1,793,635	-		MIT1002_01627	0.32	-0.0
1,793,635	-		MIT1002_01627	0.32	-0.7
1,793,635	-		MIT1002_01627	0.32	-0.3
1,793,635	-		MIT1002_01627	0.32	+0.7
1,793,640	+		MIT1002_01627	0.32	-0.7
1,793,661	+		MIT1002_01627	0.34	+0.2
1,793,667	+		MIT1002_01627	0.34	-3.5
1,793,672	+		MIT1002_01627	0.35	+2.8
1,793,674	+		MIT1002_01627	0.35	-1.2
1,793,674	+		MIT1002_01627	0.35	-0.7
1,793,684	+		MIT1002_01627	0.36	+0.4
1,793,696	+		MIT1002_01627	0.37	+1.8
1,793,696	+		MIT1002_01627	0.37	-1.2
1,793,704	-		MIT1002_01627	0.37	-0.9
1,793,721	+		MIT1002_01627	0.39	+1.1
1,793,768	+		MIT1002_01627	0.43	-0.0
1,793,770	+		MIT1002_01627	0.43	-1.0
1,793,770	+		MIT1002_01627	0.43	-1.5
1,793,776	-		MIT1002_01627	0.43	-1.7
1,793,786	+		MIT1002_01627	0.44	-0.2
1,793,794	-		MIT1002_01627	0.45	+0.4
1,793,817	+		MIT1002_01627	0.47	-2.6
1,793,825	-		MIT1002_01627	0.47	+1.0
1,793,846	+		MIT1002_01627	0.49	+0.1
1,793,854	-		MIT1002_01627	0.50	-0.6
1,793,878	+		MIT1002_01627	0.51	-0.7
1,793,885	+		MIT1002_01627	0.52	-0.0
1,793,933	+		MIT1002_01627	0.56	+0.6
1,793,935	-		MIT1002_01627	0.56	-0.2
1,793,941	-		MIT1002_01627	0.57	+2.7
1,793,941	-		MIT1002_01627	0.57	+0.1
1,793,951	-		MIT1002_01627	0.57	-0.3
1,793,975	+		MIT1002_01627	0.59	-0.2
1,793,987	-		MIT1002_01627	0.60	-0.1
1,794,182	-		MIT1002_01627	0.76	-0.0
1,794,217	+		MIT1002_01627	0.79	+0.2
1,794,225	-		MIT1002_01627	0.80	-1.9
1,794,227	+		MIT1002_01627	0.80	+0.1
1,794,227	+		MIT1002_01627	0.80	+0.2
1,794,235	-		MIT1002_01627	0.80	+0.2