Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01183

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
1,296,251	+		MIT1002_01181	0.59	-2.6
1,296,258	+		MIT1002_01181	0.60	-2.0
1,296,271	+		MIT1002_01181	0.61	-0.3
1,296,401	-		MIT1002_01181	0.71	-0.8
1,296,405	+		MIT1002_01181	0.72	+0.2
1,296,437	-		MIT1002_01181	0.74	-0.0
1,296,478	+		MIT1002_01181	0.78	+0.2
1,296,481	-		MIT1002_01181	0.78	+1.7
1,296,486	-		MIT1002_01181	0.79	+0.5
1,296,486	-		MIT1002_01181	0.79	+0.4
1,296,512	-		MIT1002_01181	0.81	+1.6
1,296,536	+		MIT1002_01181	0.83	+1.1
1,296,536	+		MIT1002_01181	0.83	+0.8
1,296,544	-		MIT1002_01181	0.83	-0.6
1,296,551	+		MIT1002_01181	0.84	-0.7
1,296,576	+		MIT1002_01181	0.86	-0.4
1,296,594	-		MIT1002_01181	0.88	-0.3
1,296,599	-		MIT1002_01181	0.88	+0.4
1,296,599	-		MIT1002_01181	0.88	+1.1
1,296,614	-		MIT1002_01181	0.89	-0.6
1,296,684	+				+0.5
1,296,684	+				+1.7
1,296,684	+				+1.1
1,296,692	-				-0.9
1,296,700	+				-0.3
1,296,754	-				+1.6
1,296,802	+				+2.7
1,296,802	+				-0.2
1,296,802	+				-0.6
1,296,802	+				+1.0
1,296,802	+				-0.8
1,296,802	+				-1.4
1,296,802	+				+0.7
1,296,802	+				+2.1
1,296,810	-				+0.1
1,296,810	-				-0.0
1,296,810	-				-0.9
1,296,810	-				-0.8
1,296,810	-				+0.4
1,296,810	-				+1.4
1,296,810	-				+3.6
1,296,824	+				-0.4
1,296,975	+				+1.7
1,296,975	+				-2.2
1,296,975	+				-4.0
1,296,975	+				+1.8
1,296,977	+				+0.5
1,296,983	-				-1.3
1,297,074	+		MIT1002_01182	0.38	-0.4
1,297,076	+		MIT1002_01182	0.39	-0.7
1,297,081	-		MIT1002_01182	0.42	+0.5
1,297,103	+		MIT1002_01182	0.52	-0.6
1,297,252	+		MIT1002_01183	0.33	+1.2
1,297,252	+		MIT1002_01183	0.33	+1.7
1,297,296	+		MIT1002_01183	0.55	+2.0
1,297,337	-		MIT1002_01183	0.76	-1.2
1,297,402	-				+0.6
1,297,406	+				-0.4
1,297,414	-				-0.7
1,297,414	-				+0.4