Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_00111

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment A, time point 4
118,402	+		MIT1002_00109	0.76	+0.5
118,402	+		MIT1002_00109	0.76	+0.1
118,402	+		MIT1002_00109	0.76	-0.3
118,402	+		MIT1002_00109	0.76	-2.2
118,404	-		MIT1002_00109	0.77	-1.6
118,404	-		MIT1002_00109	0.77	-2.2
118,410	-		MIT1002_00109	0.79	-0.3
118,410	-		MIT1002_00109	0.79	-2.8
118,410	-		MIT1002_00109	0.79	+0.2
118,410	-		MIT1002_00109	0.79	-1.3
118,410	-		MIT1002_00109	0.79	-1.5
118,410	-		MIT1002_00109	0.79	+0.1
118,421	+		MIT1002_00109	0.81	+0.2
118,432	-		MIT1002_00109	0.84	-3.6
118,439	-		MIT1002_00109	0.86	-0.4
118,441	+		MIT1002_00109	0.87	-0.4
118,441	+		MIT1002_00109	0.87	-1.8
118,441	+		MIT1002_00109	0.87	-1.0
118,441	+		MIT1002_00109	0.87	-1.0
118,441	+		MIT1002_00109	0.87	-4.8
118,441	+		MIT1002_00109	0.87	-0.5
118,441	+		MIT1002_00109	0.87	-0.8
118,449	-		MIT1002_00109	0.89	-0.6
118,449	-		MIT1002_00109	0.89	-1.3
118,449	-		MIT1002_00109	0.89	+0.9
118,449	-		MIT1002_00109	0.89	+0.2
118,449	-		MIT1002_00109	0.89	-0.4
118,604	-		MIT1002_00110	0.15	-0.5
118,644	-		MIT1002_00110	0.21	+0.7
118,680	+		MIT1002_00110	0.26	-0.9
118,682	+		MIT1002_00110	0.26	+0.6
118,685	-		MIT1002_00110	0.27	-2.2
118,690	-		MIT1002_00110	0.27	-0.9
118,692	+		MIT1002_00110	0.28	+0.1
118,760	+		MIT1002_00110	0.37	+0.3
118,780	+		MIT1002_00110	0.40	+1.9
118,822	+		MIT1002_00110	0.46	-0.6
118,822	+		MIT1002_00110	0.46	-1.2
118,825	-		MIT1002_00110	0.46	+0.1
118,876	+		MIT1002_00110	0.54	-0.4
118,900	-		MIT1002_00110	0.57	-0.5
118,918	+		MIT1002_00110	0.60	+1.7
119,002	+		MIT1002_00110	0.71	-0.5
119,002	+		MIT1002_00110	0.71	+0.5
119,002	+		MIT1002_00110	0.71	+2.3
119,002	+		MIT1002_00110	0.71	-1.5
119,002	+		MIT1002_00110	0.71	+2.6
119,002	+		MIT1002_00110	0.71	+0.7
119,010	-		MIT1002_00110	0.73	+0.3
119,010	-		MIT1002_00110	0.73	-0.3
119,010	-		MIT1002_00110	0.73	+0.4
119,032	-		MIT1002_00110	0.76	+0.7
119,035	-		MIT1002_00110	0.76	-0.7
119,039	+		MIT1002_00110	0.77	+0.6
119,042	-		MIT1002_00110	0.77	+1.4
119,078	-		MIT1002_00110	0.82	+0.5
119,086	+		MIT1002_00110	0.83	+0.5
119,093	+		MIT1002_00110	0.84	+0.8
119,093	+		MIT1002_00110	0.84	+1.2
119,093	+		MIT1002_00110	0.84	+0.0
119,101	-		MIT1002_00110	0.85	+1.0
119,204	+				-0.7
119,212	-				-0.2
119,251	-				-1.8
119,253	-				+1.2
119,257	+				-2.3
119,284	+				-0.1
119,292	-				-3.9
119,326	+				-0.3
119,426	-				-1.0
119,444	+				-1.5
119,444	+				-1.6
119,695	+		MIT1002_00111	0.14	-1.5
119,867	+		MIT1002_00111	0.23	-1.1
119,966	+		MIT1002_00111	0.27	-2.2
119,986	-		MIT1002_00111	0.28	+0.6
120,034	+		MIT1002_00111	0.31	-1.9
120,036	+		MIT1002_00111	0.31	-1.3
120,049	-		MIT1002_00111	0.31	-0.9
120,080	+		MIT1002_00111	0.33	+0.7
120,086	+		MIT1002_00111	0.33	-1.3
120,130	+		MIT1002_00111	0.35	-2.3
120,217	+		MIT1002_00111	0.40	-0.7
120,217	+		MIT1002_00111	0.40	-1.3
120,225	-		MIT1002_00111	0.40	-0.9
120,243	-		MIT1002_00111	0.41	-0.5
120,278	+		MIT1002_00111	0.42	-0.1
120,319	+		MIT1002_00111	0.44	-0.7
120,407	+		MIT1002_00111	0.49	-0.9
120,416	-		MIT1002_00111	0.49	-2.2
120,458	-		MIT1002_00111	0.51	-2.6
120,567	+		MIT1002_00111	0.56	-0.1
120,814	+		MIT1002_00111	0.68	-2.5
120,822	-		MIT1002_00111	0.69	-2.2
120,822	-		MIT1002_00111	0.69	-2.1
120,990	+		MIT1002_00111	0.77	-0.7
120,998	-		MIT1002_00111	0.77	-2.0
121,063	-		MIT1002_00111	0.80	-0.1
121,144	-		MIT1002_00111	0.84	-0.7
121,210	-		MIT1002_00111	0.87	-0.9
121,506	-				+0.1
121,517	+				+0.5
121,577	-		MIT1002_00112	0.15	-0.3
121,577	-		MIT1002_00112	0.15	-1.4
121,601	+		MIT1002_00112	0.18	+1.3
121,613	+		MIT1002_00112	0.19	-1.0
121,613	+		MIT1002_00112	0.19	-0.4
121,661	-		MIT1002_00112	0.25	-0.3
121,749	-		MIT1002_00112	0.37	-0.7
121,781	-		MIT1002_00112	0.41	-0.5
121,791	+		MIT1002_00112	0.42	-0.1
121,792	-		MIT1002_00112	0.42	-0.1
121,792	-		MIT1002_00112	0.42	+0.8
121,792	-		MIT1002_00112	0.42	-0.6
121,895	-		MIT1002_00112	0.56	-1.8
121,900	-		MIT1002_00112	0.56	-0.8
121,952	-		MIT1002_00112	0.63	-1.6
122,095	+		MIT1002_00112	0.81	+1.2
122,105	+		MIT1002_00112	0.83	+1.7
122,127	+		MIT1002_00112	0.85	+0.2
122,149	+		MIT1002_00112	0.88	-2.7
122,151	+		MIT1002_00112	0.89	-0.1
122,151	+		MIT1002_00112	0.89	+1.0
122,151	+		MIT1002_00112	0.89	+0.2
122,151	+		MIT1002_00112	0.89	-1.2
122,151	+		MIT1002_00112	0.89	-0.0
122,151	+		MIT1002_00112	0.89	+0.9
122,158	+		MIT1002_00112	0.89	-1.2
122,159	-		MIT1002_00112	0.90	-0.9
122,159	-		MIT1002_00112	0.90	-0.1
122,159	-		MIT1002_00112	0.90	-1.7
122,179	-				-1.8
122,356	+		MIT1002_00113	0.23	-0.9
122,364	-		MIT1002_00113	0.24	-3.5
122,374	-		MIT1002_00113	0.26	-3.2
122,388	+		MIT1002_00113	0.29	-3.1
122,412	+		MIT1002_00113	0.34	-3.6
122,447	+		MIT1002_00113	0.42	-3.4