Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03829

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3
4,277,260	-				-1.2
4,277,350	-		MIT1002_03828	0.11	-3.9
4,277,376	+		MIT1002_03828	0.13	-4.3
4,277,386	+		MIT1002_03828	0.14	-4.8
4,277,386	+		MIT1002_03828	0.14	-0.9
4,277,386	+		MIT1002_03828	0.14	-1.6
4,277,386	+		MIT1002_03828	0.14	-0.9
4,277,394	-		MIT1002_03828	0.15	-1.2
4,277,394	-		MIT1002_03828	0.15	-2.1
4,277,394	-		MIT1002_03828	0.15	-2.8
4,277,399	+		MIT1002_03828	0.16	-3.2
4,277,490	+		MIT1002_03828	0.25	+0.1
4,277,512	+		MIT1002_03828	0.27	-4.5
4,277,512	+		MIT1002_03828	0.27	-3.0
4,277,512	+		MIT1002_03828	0.27	-2.0
4,277,520	-		MIT1002_03828	0.28	-3.1
4,277,520	-		MIT1002_03828	0.28	-2.8
4,277,520	-		MIT1002_03828	0.28	-3.7
4,277,520	-		MIT1002_03828	0.28	-2.4
4,277,539	+		MIT1002_03828	0.30	-2.7
4,277,563	+		MIT1002_03828	0.32	-0.7
4,277,578	+		MIT1002_03828	0.34	-1.5
4,277,579	-		MIT1002_03828	0.34	-5.2
4,277,589	+		MIT1002_03828	0.35	+0.1
4,277,682	-		MIT1002_03828	0.44	-1.5
4,277,724	-		MIT1002_03828	0.48	-3.7
4,277,795	+		MIT1002_03828	0.55	-2.8
4,277,802	+		MIT1002_03828	0.56	-3.2
4,277,803	+		MIT1002_03828	0.56	-2.4
4,277,803	-		MIT1002_03828	0.56	-2.5
4,277,811	-		MIT1002_03828	0.57	-2.4
4,277,816	-		MIT1002_03828	0.57	-0.8
4,277,816	-		MIT1002_03828	0.57	-3.4
4,277,938	+		MIT1002_03828	0.69	-3.9
4,277,946	-		MIT1002_03828	0.70	-3.6
4,277,958	+		MIT1002_03828	0.71	-1.6
4,277,966	-		MIT1002_03828	0.72	-1.0
4,277,966	-		MIT1002_03828	0.72	-2.8
4,277,966	-		MIT1002_03828	0.72	-3.1
4,277,966	-		MIT1002_03828	0.72	-3.1
4,277,966	-		MIT1002_03828	0.72	-1.1
4,277,966	-		MIT1002_03828	0.72	-2.3
4,277,966	-		MIT1002_03828	0.72	-4.3
4,277,996	+		MIT1002_03828	0.75	-2.5
4,277,996	+		MIT1002_03828	0.75	-2.7
4,278,028	+		MIT1002_03828	0.78	-1.5
4,278,135	-		MIT1002_03828	0.89	-3.4
4,278,138	+		MIT1002_03828	0.89	-1.9
4,278,210	-				-3.7
4,278,215	+				-1.2
4,278,215	+				-2.9
4,278,223	-				-1.6
4,278,223	-				-1.8
4,278,223	-				-0.5
4,278,257	-				+0.4
4,278,279	+				-3.0
4,278,289	-				+0.5
4,278,289	-				-0.3
4,278,360	-		MIT1002_03829	0.11	-1.4
4,278,420	-		MIT1002_03829	0.17	+0.4
4,278,458	+		MIT1002_03829	0.21	-1.3
4,278,599	-		MIT1002_03829	0.36	-0.1
4,278,606	-		MIT1002_03829	0.37	-0.6
4,278,606	-		MIT1002_03829	0.37	+0.6
4,278,639	+		MIT1002_03829	0.40	-2.0
4,278,639	+		MIT1002_03829	0.40	-1.9
4,278,643	-		MIT1002_03829	0.40	-0.2
4,278,647	+		MIT1002_03829	0.41	-2.6
4,278,647	+		MIT1002_03829	0.41	-2.4
4,278,693	+		MIT1002_03829	0.46	-3.5
4,278,782	+		MIT1002_03829	0.55	-0.7
4,278,789	+		MIT1002_03829	0.56	-3.1
4,278,810	-		MIT1002_03829	0.58	-0.4
4,278,869	+		MIT1002_03829	0.64	-2.9
4,278,869	+		MIT1002_03829	0.64	-2.7
4,278,897	+		MIT1002_03829	0.67	-3.7
4,278,905	-		MIT1002_03829	0.68	+0.1
4,278,905	-		MIT1002_03829	0.68	-0.6
4,278,922	-		MIT1002_03829	0.70	+0.4
4,278,976	+		MIT1002_03829	0.75	-4.7
4,279,021	+		MIT1002_03829	0.80	-3.0
4,279,029	-		MIT1002_03829	0.81	-0.7
4,279,056	+		MIT1002_03829	0.84	-2.6
4,279,058	+		MIT1002_03829	0.84	-1.8
4,279,096	-		MIT1002_03829	0.88	-1.6
4,279,096	-		MIT1002_03829	0.88	+0.2
4,279,104	+		MIT1002_03829	0.89	-3.9
4,279,125	+				-2.4
4,279,125	+				-2.2
4,279,125	+				-0.6
4,279,134	+				-5.2
4,279,222	+				-1.7
4,279,237	+				-0.9
4,279,246	+				-2.6
4,279,462	-				-0.3
4,279,479	+				-1.5
4,279,520	-				-0.3
4,279,594	+				-3.4
4,279,607	-				-4.3
4,279,653	-		MIT1002_03830	0.12	+0.2
4,279,729	+		MIT1002_03830	0.22	-2.2
4,279,748	+		MIT1002_03830	0.24	-0.6
4,279,758	+		MIT1002_03830	0.26	+1.7
4,279,763	+		MIT1002_03830	0.26	-4.3
4,279,893	+		MIT1002_03830	0.44	-3.0
4,279,901	-		MIT1002_03830	0.45	-0.7
4,279,908	+		MIT1002_03830	0.46	-2.9
4,279,911	-		MIT1002_03830	0.46	-2.3
4,279,966	+		MIT1002_03830	0.53	-1.1
4,279,966	+		MIT1002_03830	0.53	-0.7
4,279,986	+		MIT1002_03830	0.56	-4.2
4,279,989	-		MIT1002_03830	0.57	-2.8
4,279,991	+		MIT1002_03830	0.57	-1.7
4,279,999	-		MIT1002_03830	0.58	-1.2
4,280,031	+		MIT1002_03830	0.62	-2.7
4,280,039	-		MIT1002_03830	0.63	-3.6
4,280,177	-		MIT1002_03830	0.82	-1.1
4,280,183	+		MIT1002_03830	0.82	-2.4