Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03508

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3
3,919,023	-		MIT1002_03507	0.45	+4.4
3,919,052	+		MIT1002_03507	0.47	+2.0
3,919,052	+		MIT1002_03507	0.47	+0.9
3,919,060	-		MIT1002_03507	0.47	+0.8
3,919,060	-		MIT1002_03507	0.47	-0.1
3,919,060	-		MIT1002_03507	0.47	+0.6
3,919,072	+		MIT1002_03507	0.48	+4.1
3,919,080	-		MIT1002_03507	0.48	+4.4
3,919,080	-		MIT1002_03507	0.48	+2.5
3,919,100	+		MIT1002_03507	0.50	+3.9
3,919,137	+		MIT1002_03507	0.52	+5.1
3,919,157	-		MIT1002_03507	0.53	+5.0
3,919,167	-		MIT1002_03507	0.53	+3.8
3,919,193	-		MIT1002_03507	0.55	+4.0
3,919,303	+		MIT1002_03507	0.61	+5.5
3,919,373	+		MIT1002_03507	0.66	+3.8
3,919,410	+		MIT1002_03507	0.68	+4.7
3,919,430	+		MIT1002_03507	0.69	+5.9
3,919,437	-		MIT1002_03507	0.69	+5.5
3,919,454	+		MIT1002_03507	0.70	+4.8
3,919,462	-		MIT1002_03507	0.71	+4.4
3,919,537	-		MIT1002_03507	0.75	+4.9
3,919,590	+		MIT1002_03507	0.78	+4.6
3,919,696	+		MIT1002_03507	0.84	+3.9
3,919,910	-				+4.3
3,919,910	-				+5.1
3,919,910	-				+6.2
3,919,946	+				+5.2
3,919,947	+				+5.1
3,919,972	+				+4.6
3,919,980	-				+5.0
3,919,998	+		MIT1002_03508	0.13	+3.3
3,920,006	-		MIT1002_03508	0.16	+4.2
3,920,062	-		MIT1002_03508	0.37	+3.7
3,920,062	-		MIT1002_03508	0.37	+3.5
3,920,157	+		MIT1002_03508	0.72	+5.0
3,920,184	-		MIT1002_03508	0.82	+5.5
3,920,190	-		MIT1002_03508	0.85	+5.6
3,920,240	-				+5.9
3,920,240	-				+6.0
3,920,250	-				+5.0
3,920,286	-				+4.7
3,920,375	-				+4.4
3,920,387	-				+5.7
3,920,416	+				+0.5
3,920,417	+				-0.5
3,920,430	-				-3.0
3,920,509	-				+6.2
3,920,517	-				+6.2
3,920,523	-				+5.7
3,920,533	-				+4.6
3,920,625	+				+6.4
3,920,625	+				+6.7
3,920,625	+				+5.3
3,920,633	-				+5.6
3,920,633	-				+5.5
3,920,633	-				+5.6
3,920,710	+				+5.4
3,920,713	-				+6.1
3,920,713	-				+5.0
3,920,713	-				+6.8
3,920,718	-				+6.4
3,920,786	+				+5.6
3,920,833	-		MIT1002_03509	0.10	+6.1
3,920,859	-		MIT1002_03509	0.11	+5.6
3,920,869	-		MIT1002_03509	0.11	+6.1
3,920,871	-		MIT1002_03509	0.11	+6.5
3,920,874	-		MIT1002_03509	0.11	+4.5
3,920,906	+		MIT1002_03509	0.12	+4.8
3,920,914	-		MIT1002_03509	0.12	+5.8
3,920,914	-		MIT1002_03509	0.12	+5.9
3,920,972	-		MIT1002_03509	0.14	+5.4
3,920,997	+		MIT1002_03509	0.15	+6.4
3,920,998	+		MIT1002_03509	0.15	+6.3
3,921,018	+		MIT1002_03509	0.15	+6.1
3,921,018	+		MIT1002_03509	0.15	+5.6
3,921,026	-		MIT1002_03509	0.16	+5.3
3,921,026	-		MIT1002_03509	0.16	+5.7
3,921,029	+		MIT1002_03509	0.16	+2.0
3,921,036	-		MIT1002_03509	0.16	+5.9
3,921,037	-		MIT1002_03509	0.16	+6.0
3,921,039	+		MIT1002_03509	0.16	+5.3
3,921,048	-		MIT1002_03509	0.16	+7.1
3,921,054	-		MIT1002_03509	0.16	+4.7
3,921,094	+		MIT1002_03509	0.18	+5.4
3,921,155	+		MIT1002_03509	0.19	+5.6
3,921,183	-		MIT1002_03509	0.20	+5.5
3,921,217	+		MIT1002_03509	0.21	+5.4