Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03387

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3
3,787,490	+		MIT1002_03385	0.72	+1.7
3,787,492	+		MIT1002_03385	0.73	-0.3
3,787,498	-		MIT1002_03385	0.74	-0.0
3,787,508	-		MIT1002_03385	0.75	-1.6
3,787,518	+		MIT1002_03385	0.77	-0.9
3,787,535	+		MIT1002_03385	0.79	+1.0
3,787,633	-				+1.1
3,787,731	-				+0.6
3,787,740	+				-2.3
3,787,754	+				+0.2
3,787,761	+				+0.5
3,787,761	+				-0.7
3,787,938	+				+1.0
3,787,950	+				-2.0
3,787,958	-				+0.7
3,788,108	+		MIT1002_03386	0.35	-0.1
3,788,137	+		MIT1002_03386	0.45	-0.0
3,788,145	-		MIT1002_03386	0.48	-3.6
3,788,178	-		MIT1002_03386	0.59	-0.3
3,788,317	+				+0.9
3,788,325	-				-0.9
3,788,343	+				-0.7
3,788,351	-				-0.0
3,788,351	-				+0.3
3,788,351	-				-1.6
3,788,502	+				-0.9
3,788,510	-				-0.4
3,788,822	+		MIT1002_03387	0.34	-0.0
3,788,882	+		MIT1002_03387	0.41	+1.1
3,788,889	-		MIT1002_03387	0.41	+0.3
3,788,895	+		MIT1002_03387	0.42	-1.4
3,788,923	+		MIT1002_03387	0.45	-0.2
3,788,923	-		MIT1002_03387	0.45	+0.1
3,788,972	+		MIT1002_03387	0.50	-0.3
3,789,054	+		MIT1002_03387	0.58	-1.0
3,789,060	+		MIT1002_03387	0.59	-1.1
3,789,166	-		MIT1002_03387	0.70	-2.6
3,789,180	-		MIT1002_03387	0.71	+0.1
3,789,239	+		MIT1002_03387	0.77	-0.2
3,789,263	+		MIT1002_03387	0.80	-1.3
3,789,264	-		MIT1002_03387	0.80	+0.1
3,789,268	+		MIT1002_03387	0.80	+1.2
3,789,271	-		MIT1002_03387	0.80	+0.7
3,789,279	-		MIT1002_03387	0.81	+0.8
3,789,279	-		MIT1002_03387	0.81	-0.9
3,789,295	+		MIT1002_03387	0.83	-0.4
3,789,311	-		MIT1002_03387	0.85	+0.7
3,789,313	-		MIT1002_03387	0.85	-2.9
3,789,345	+		MIT1002_03387	0.88	-1.1
3,789,379	-				-0.5
3,789,791	+		MIT1002_03388	0.13	+1.8
3,789,821	+		MIT1002_03388	0.15	-0.3
3,789,823	+		MIT1002_03388	0.16	+0.8
3,789,857	+		MIT1002_03388	0.19	-2.7
3,789,867	+		MIT1002_03388	0.20	+0.1
3,789,869	+		MIT1002_03388	0.20	+0.3
3,789,891	-		MIT1002_03388	0.22	-0.2
3,789,927	+		MIT1002_03388	0.25	+0.3
3,789,999	+		MIT1002_03388	0.32	+0.2
3,790,017	-		MIT1002_03388	0.33	+0.6
3,790,037	+		MIT1002_03388	0.35	-1.1
3,790,039	-		MIT1002_03388	0.35	+0.1
3,790,045	-		MIT1002_03388	0.36	-2.6
3,790,047	-		MIT1002_03388	0.36	-0.0
3,790,053	+		MIT1002_03388	0.37	-0.6
3,790,063	+		MIT1002_03388	0.38	+0.1
3,790,063	+		MIT1002_03388	0.38	+0.7
3,790,063	+		MIT1002_03388	0.38	-0.1
3,790,063	+		MIT1002_03388	0.38	-0.3
3,790,071	-		MIT1002_03388	0.38	+0.4
3,790,148	+		MIT1002_03388	0.45	+0.3
3,790,148	+		MIT1002_03388	0.45	-0.5
3,790,156	-		MIT1002_03388	0.46	+0.3
3,790,168	+		MIT1002_03388	0.47	+0.4
3,790,192	+		MIT1002_03388	0.50	-2.3
3,790,207	+		MIT1002_03388	0.51	+3.1
3,790,215	-		MIT1002_03388	0.52	-2.0
3,790,263	+		MIT1002_03388	0.56	+1.4
3,790,273	+		MIT1002_03388	0.57	+0.9
3,790,329	+		MIT1002_03388	0.62	+0.2
3,790,329	+		MIT1002_03388	0.62	-0.1