Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03373

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3
3,773,267	+		MIT1002_03372	0.29	-1.1
3,773,275	-		MIT1002_03372	0.29	+0.7
3,773,330	+		MIT1002_03372	0.34	-0.0
3,773,338	-		MIT1002_03372	0.35	+1.7
3,773,458	+		MIT1002_03372	0.46	+0.9
3,773,570	+		MIT1002_03372	0.55	-0.4
3,773,570	+		MIT1002_03372	0.55	-1.9
3,773,570	+		MIT1002_03372	0.55	+0.5
3,773,570	+		MIT1002_03372	0.55	-1.2
3,773,570	+		MIT1002_03372	0.55	+0.1
3,773,578	-		MIT1002_03372	0.56	-0.4
3,773,578	-		MIT1002_03372	0.56	-0.2
3,773,578	-		MIT1002_03372	0.56	+0.4
3,773,580	+		MIT1002_03372	0.56	+0.1
3,773,721	-		MIT1002_03372	0.69	-0.2
3,773,748	-		MIT1002_03372	0.71	-0.3
3,773,772	-		MIT1002_03372	0.73	+1.1
3,773,837	+		MIT1002_03372	0.79	+0.2
3,773,837	+		MIT1002_03372	0.79	+0.3
3,773,845	-		MIT1002_03372	0.80	-1.5
3,773,892	-		MIT1002_03372	0.84	-0.8
3,773,892	-		MIT1002_03372	0.84	-0.1
3,773,906	+		MIT1002_03372	0.85	-0.6
3,773,909	-		MIT1002_03372	0.86	+0.7
3,773,958	-		MIT1002_03372	0.90	-0.8
3,773,958	-		MIT1002_03372	0.90	-0.7
3,773,964	+				+2.0
3,773,979	-				-0.3
3,774,041	+				+0.3
3,774,203	+				-0.2
3,774,270	-				-1.4
3,774,328	-				+0.7
3,774,382	+				+2.2
3,774,391	+				-0.1
3,774,408	-		MIT1002_03373	0.11	-2.3
3,774,410	-		MIT1002_03373	0.11	-0.1
3,774,430	-		MIT1002_03373	0.13	+0.1
3,774,445	-		MIT1002_03373	0.14	-2.9
3,774,556	-		MIT1002_03373	0.21	+0.9
3,774,642	+		MIT1002_03373	0.27	-1.3
3,774,720	-		MIT1002_03373	0.33	+0.1
3,774,726	+		MIT1002_03373	0.33	-1.1
3,774,915	-		MIT1002_03373	0.47	-0.4
3,774,942	+		MIT1002_03373	0.49	-0.3
3,774,950	-		MIT1002_03373	0.49	+0.1
3,775,015	-		MIT1002_03373	0.54	-0.1
3,775,045	+		MIT1002_03373	0.56	-1.6
3,775,087	+		MIT1002_03373	0.59	-2.1
3,775,087	+		MIT1002_03373	0.59	-0.2
3,775,095	-		MIT1002_03373	0.59	+0.7
3,775,154	-		MIT1002_03373	0.64	+0.6
3,775,265	+		MIT1002_03373	0.71	-0.0
3,775,318	+		MIT1002_03373	0.75	-1.8
3,775,326	-		MIT1002_03373	0.76	-0.5
3,775,415	+		MIT1002_03373	0.82	+0.2
3,775,427	+		MIT1002_03373	0.83	-0.4
3,775,566	-				+1.6
3,775,609	-				+0.7
3,775,609	-				+0.2
3,775,609	-				+0.3
3,775,919	-		MIT1002_03374	0.62	-2.2
3,775,988	+		MIT1002_03374	0.85	-0.8
3,775,989	+		MIT1002_03374	0.85	+0.3
3,775,998	-		MIT1002_03374	0.88	-0.8
3,776,022	-				-2.9
3,776,022	-				-0.9
3,776,047	+				-2.2
3,776,047	+				+0.2
3,776,055	+				-1.6
3,776,055	+				-1.4
3,776,055	+				+1.3
3,776,069	+				-0.5
3,776,077	-				+1.1
3,776,077	-				+1.0
3,776,077	-				+0.3
3,776,087	+				-0.8
3,776,198	+				-1.3
3,776,227	+		MIT1002_03375	0.12	-0.2
3,776,227	+		MIT1002_03375	0.12	-0.0
3,776,235	-		MIT1002_03375	0.13	+1.0
3,776,245	-		MIT1002_03375	0.15	+2.2
3,776,252	+		MIT1002_03375	0.16	-0.2
3,776,252	-		MIT1002_03375	0.16	+0.6
3,776,295	+		MIT1002_03375	0.24	-0.8
3,776,364	+		MIT1002_03375	0.36	+1.3
3,776,381	+		MIT1002_03375	0.39	-0.6
3,776,416	+		MIT1002_03375	0.45	-1.4
3,776,550	+		MIT1002_03375	0.69	+1.8
3,776,558	-		MIT1002_03375	0.70	+0.5
3,776,573	-		MIT1002_03375	0.73	+0.3
3,776,584	+		MIT1002_03375	0.75	+0.0
3,776,584	+		MIT1002_03375	0.75	+1.3