Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03215

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3
3,585,649	-		MIT1002_03214	0.23	+1.2
3,585,700	-		MIT1002_03214	0.29	-0.9
3,585,710	+		MIT1002_03214	0.30	-1.1
3,585,728	-		MIT1002_03214	0.32	+1.4
3,585,728	-		MIT1002_03214	0.32	-1.8
3,585,740	-		MIT1002_03214	0.33	-1.2
3,585,765	+		MIT1002_03214	0.36	+0.1
3,585,775	+		MIT1002_03214	0.37	-3.3
3,585,859	+		MIT1002_03214	0.47	+0.5
3,585,867	-		MIT1002_03214	0.48	+0.1
3,585,867	-		MIT1002_03214	0.48	+1.1
3,585,867	-		MIT1002_03214	0.48	-1.7
3,585,886	-		MIT1002_03214	0.50	-0.1
3,585,918	+		MIT1002_03214	0.53	+0.6
3,585,961	+		MIT1002_03214	0.58	+0.2
3,586,008	-		MIT1002_03214	0.63	+0.3
3,586,055	-		MIT1002_03214	0.69	+1.2
3,586,055	-		MIT1002_03214	0.69	+1.3
3,586,065	-		MIT1002_03214	0.70	-0.4
3,586,115	+		MIT1002_03214	0.75	-0.9
3,586,123	-		MIT1002_03214	0.76	+0.1
3,586,123	-		MIT1002_03214	0.76	+1.2
3,586,138	-		MIT1002_03214	0.78	-0.1
3,586,138	-		MIT1002_03214	0.78	+0.3
3,586,138	-		MIT1002_03214	0.78	+0.7
3,586,174	-		MIT1002_03214	0.82	+0.5
3,586,184	-		MIT1002_03214	0.83	+0.3
3,586,353	-				+0.7
3,586,413	-				+0.5
3,586,455	+				+2.3
3,586,474	-				-0.9
3,586,528	+				-0.1
3,586,570	+				-0.7
3,586,694	-				-0.6
3,586,715	+		MIT1002_03215	0.10	-0.2
3,586,725	-		MIT1002_03215	0.11	+1.3
3,587,363	+		MIT1002_03215	0.68	-2.4
3,587,543	-		MIT1002_03215	0.85	-1.9
3,587,562	-		MIT1002_03215	0.86	-0.2
3,587,655	-				+0.4
3,587,668	+				-0.4
3,587,693	+				-0.9
3,587,693	+				-1.2
3,587,710	-				-0.4
3,587,851	+		MIT1002_03216	0.20	+1.5
3,587,867	+		MIT1002_03216	0.22	+1.3
3,587,870	-		MIT1002_03216	0.22	-0.4
3,587,923	+		MIT1002_03216	0.30	-0.4
3,587,923	-		MIT1002_03216	0.30	-0.8
3,587,941	-		MIT1002_03216	0.32	-0.4
3,588,019	-		MIT1002_03216	0.43	-1.9
3,588,032	-		MIT1002_03216	0.44	+0.4
3,588,041	+		MIT1002_03216	0.46	+0.4
3,588,049	-		MIT1002_03216	0.47	-0.3
3,588,082	+		MIT1002_03216	0.51	-1.2
3,588,083	-		MIT1002_03216	0.51	-0.1
3,588,128	+		MIT1002_03216	0.58	-0.4
3,588,187	-		MIT1002_03216	0.66	+0.0
3,588,187	-		MIT1002_03216	0.66	-0.7
3,588,196	+		MIT1002_03216	0.67	+0.1
3,588,247	-		MIT1002_03216	0.74	-0.5
3,588,247	-		MIT1002_03216	0.74	-0.6
3,588,299	-		MIT1002_03216	0.81	+0.5
3,588,311	-		MIT1002_03216	0.82	+0.4
3,588,341	+		MIT1002_03216	0.87	+0.2
3,588,470	+				-0.6
3,588,483	-				-0.1
3,588,485	+				+1.2
3,588,491	-				-1.4
3,588,493	-				-1.1
3,588,493	-				-0.3
3,588,498	-				-0.8
3,588,498	-				-0.2
3,588,544	-		MIT1002_03217	0.10	+1.3
3,588,607	+		MIT1002_03217	0.32	-0.4
3,588,607	+		MIT1002_03217	0.32	+0.4
3,588,607	+		MIT1002_03217	0.32	+0.4
3,588,615	-		MIT1002_03217	0.34	-2.2
3,588,691	+		MIT1002_03217	0.60	+1.0
3,588,691	+		MIT1002_03217	0.60	-0.9
3,588,696	+		MIT1002_03217	0.62	+0.8