Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03067

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3
3,419,766	+		MIT1002_03065	0.83	+2.7
3,419,788	+		MIT1002_03065	0.84	+0.9
3,419,788	+		MIT1002_03065	0.84	-0.2
3,419,796	-		MIT1002_03065	0.85	-0.5
3,419,796	-		MIT1002_03065	0.85	+1.2
3,419,805	+		MIT1002_03065	0.85	-0.4
3,419,807	-		MIT1002_03065	0.85	-1.9
3,419,813	-		MIT1002_03065	0.86	+1.6
3,419,852	+		MIT1002_03065	0.87	-1.1
3,419,912	-				-2.3
3,419,970	+				+0.6
3,419,970	+				+0.6
3,419,973	-				+0.2
3,419,978	-				-2.1
3,419,981	+				+1.0
3,419,981	+				-0.2
3,419,981	+				+0.0
3,419,981	+				+0.2
3,419,989	-				+0.2
3,419,989	-				-0.7
3,419,989	-				+0.5
3,419,989	-				+1.3
3,419,999	+				-0.6
3,420,060	-				+0.1
3,420,193	+		MIT1002_03066	0.25	+0.7
3,420,206	+		MIT1002_03066	0.29	+0.8
3,420,214	-		MIT1002_03066	0.31	-0.7
3,420,266	-		MIT1002_03066	0.46	+0.1
3,420,290	-		MIT1002_03066	0.54	+0.7
3,420,290	-		MIT1002_03066	0.54	-0.1
3,420,291	+		MIT1002_03066	0.54	+1.2
3,420,353	+		MIT1002_03066	0.72	+1.6
3,420,356	-		MIT1002_03066	0.73	+0.8
3,420,409	-		MIT1002_03066	0.89	-0.3
3,420,420	-				+0.2
3,420,496	-				-0.2
3,420,583	+				-2.2
3,420,607	+				-0.7
3,420,708	+				-0.1
3,420,708	+				-0.0
3,420,732	-				-0.6
3,420,767	+				-0.0
3,420,827	-				-0.7
3,420,834	-				-2.1
3,420,856	+		MIT1002_03067	0.11	+0.6
3,420,886	+		MIT1002_03067	0.13	-1.5
3,420,894	-		MIT1002_03067	0.13	+0.3
3,420,931	+		MIT1002_03067	0.15	+1.0
3,420,939	-		MIT1002_03067	0.15	+0.4
3,420,977	+		MIT1002_03067	0.17	-0.9
3,420,985	-		MIT1002_03067	0.18	-1.2
3,421,000	-		MIT1002_03067	0.19	+0.7
3,421,010	-		MIT1002_03067	0.19	+2.4
3,421,117	-		MIT1002_03067	0.25	+0.1
3,421,146	+		MIT1002_03067	0.27	-1.0
3,421,235	-		MIT1002_03067	0.31	-0.2
3,421,248	+		MIT1002_03067	0.32	-0.2
3,421,256	-		MIT1002_03067	0.33	-0.9
3,421,302	-		MIT1002_03067	0.35	+0.5
3,421,320	-		MIT1002_03067	0.36	-0.9
3,421,415	-		MIT1002_03067	0.41	-1.2
3,421,430	+		MIT1002_03067	0.42	-1.9
3,421,431	-		MIT1002_03067	0.42	+0.5
3,421,438	-		MIT1002_03067	0.42	+0.1
3,421,573	+		MIT1002_03067	0.50	-0.9
3,421,607	+		MIT1002_03067	0.52	-0.1
3,421,641	+		MIT1002_03067	0.53	+0.1
3,421,649	-		MIT1002_03067	0.54	+0.9
3,421,649	-		MIT1002_03067	0.54	-1.9
3,421,649	-		MIT1002_03067	0.54	+0.6
3,421,649	-		MIT1002_03067	0.54	-1.2
3,421,807	-		MIT1002_03067	0.62	-1.2
3,421,838	+		MIT1002_03067	0.64	-0.1
3,421,948	-		MIT1002_03067	0.70	+1.5
3,421,985	-		MIT1002_03067	0.72	+2.6
3,422,033	+		MIT1002_03067	0.75	-1.1
3,422,033	-		MIT1002_03067	0.75	-0.6
3,422,042	+		MIT1002_03067	0.75	-0.7
3,422,050	-		MIT1002_03067	0.76	-0.6
3,422,052	+		MIT1002_03067	0.76	+1.5
3,422,052	+		MIT1002_03067	0.76	+0.0
3,422,060	-		MIT1002_03067	0.76	-1.8
3,422,145	+		MIT1002_03067	0.81	+0.4
3,422,272	-		MIT1002_03067	0.88	+0.4
3,422,440	+				+1.1
3,422,446	+				-2.8
3,422,448	-				+2.0
3,422,451	+				+0.6
3,422,453	+				-0.8
3,422,459	-				+1.9
3,422,478	-				-0.4
3,422,612	-				-0.6
3,422,701	+				-1.2
3,422,711	+				-1.7
3,422,760	+				-0.7
3,422,774	+				+1.6
3,422,776	+				-0.7
3,422,776	+				+0.7
3,422,799	-				-0.5
3,422,822	-		MIT1002_03068	0.13	+0.2
3,422,824	-		MIT1002_03068	0.14	+0.9
3,422,910	+		MIT1002_03068	0.27	-0.2
3,422,913	-		MIT1002_03068	0.27	-0.4
3,422,918	-		MIT1002_03068	0.28	-1.8
3,422,960	+		MIT1002_03068	0.35	-1.0
3,422,979	-		MIT1002_03068	0.38	+0.8
3,422,998	+		MIT1002_03068	0.41	-0.9
3,423,034	+		MIT1002_03068	0.46	+0.3
3,423,035	-		MIT1002_03068	0.46	+1.5
3,423,035	-		MIT1002_03068	0.46	-2.8
3,423,240	-		MIT1002_03068	0.78	+0.9
3,423,265	+		MIT1002_03068	0.82	+1.0
3,423,272	-		MIT1002_03068	0.83	+0.5
3,423,285	+		MIT1002_03068	0.85	-0.3
3,423,305	+		MIT1002_03068	0.88	-2.2
3,423,380	+				-0.3
3,423,381	-				+0.8
3,423,388	-				+1.1
3,423,388	-				+0.3
3,423,388	-				-0.4
3,423,388	-				+1.3
3,423,394	+				+1.2
3,423,488	-				+0.1
3,423,495	+				-0.3