Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_02347

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3
2,614,420	+		MIT1002_02346	0.50	+1.1
2,614,422	+		MIT1002_02346	0.50	+1.1
2,614,476	-		MIT1002_02346	0.55	-0.0
2,614,528	+		MIT1002_02346	0.59	+0.4
2,614,528	+		MIT1002_02346	0.59	+0.6
2,614,536	-		MIT1002_02346	0.60	+0.3
2,614,536	-		MIT1002_02346	0.60	-0.5
2,614,536	-		MIT1002_02346	0.60	+0.7
2,614,541	-		MIT1002_02346	0.60	-1.3
2,614,551	-		MIT1002_02346	0.61	+0.2
2,614,561	+		MIT1002_02346	0.62	-0.1
2,614,581	+		MIT1002_02346	0.64	-0.2
2,614,581	+		MIT1002_02346	0.64	+1.6
2,614,708	+		MIT1002_02346	0.74	+0.8
2,614,708	+		MIT1002_02346	0.74	+0.4
2,614,722	-		MIT1002_02346	0.76	+1.0
2,614,733	+		MIT1002_02346	0.76	+0.6
2,614,733	+		MIT1002_02346	0.76	+1.2
2,614,799	-		MIT1002_02346	0.82	-2.9
2,614,822	+		MIT1002_02346	0.84	-0.0
2,614,839	+		MIT1002_02346	0.85	-1.7
2,614,861	-		MIT1002_02346	0.87	+1.1
2,614,952	+				+1.0
2,615,029	-				-0.6
2,615,029	-				-1.9
2,615,171	+				+0.8
2,615,182	-				-0.6
2,615,249	-				+0.2
2,615,249	-				-0.1
2,615,273	+				+0.8
2,615,298	+				+0.4
2,615,298	+				-0.7
2,615,298	+				-1.0
2,615,390	-				+0.3
2,615,451	-		MIT1002_02347	0.27	-0.7
2,615,577	-		MIT1002_02347	0.74	+0.3
2,615,577	-		MIT1002_02347	0.74	-3.3
2,615,764	+				+0.7
2,615,772	-				-0.2
2,615,792	-				+0.6
2,616,023	+				-2.9
2,616,049	+		MIT1002_02348	0.12	-2.1
2,616,087	-		MIT1002_02348	0.16	-3.3
2,616,087	-		MIT1002_02348	0.16	-1.6
2,616,136	+		MIT1002_02348	0.21	-6.5
2,616,184	-		MIT1002_02348	0.26	-2.4
2,616,195	+		MIT1002_02348	0.27	-3.8
2,616,203	-		MIT1002_02348	0.27	-3.6
2,616,203	-		MIT1002_02348	0.27	-4.3
2,616,269	-		MIT1002_02348	0.34	-3.1
2,616,559	-		MIT1002_02348	0.64	-1.3
2,616,603	+		MIT1002_02348	0.68	-2.6
2,616,608	+		MIT1002_02348	0.68	-3.5
2,616,608	+		MIT1002_02348	0.68	-3.3
2,616,608	+		MIT1002_02348	0.68	-4.9
2,616,608	+		MIT1002_02348	0.68	-2.1