Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01903

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3
2,114,569	+		MIT1002_01901	0.60	+0.8
2,114,569	+		MIT1002_01901	0.60	+0.6
2,114,576	+		MIT1002_01901	0.62	+0.5
2,114,577	-		MIT1002_01901	0.62	+2.0
2,114,615	+		MIT1002_01901	0.70	-1.2
2,114,837	+				+0.8
2,114,845	-				-0.0
2,114,845	-				+0.1
2,114,869	+		MIT1002_01902	0.13	-0.9
2,114,924	+		MIT1002_01902	0.25	+1.0
2,114,954	-		MIT1002_01902	0.31	+0.2
2,115,019	-		MIT1002_01902	0.45	+1.1
2,115,048	+		MIT1002_01902	0.51	-2.7
2,115,054	-		MIT1002_01902	0.53	-2.6
2,115,058	+		MIT1002_01902	0.54	+0.8
2,115,058	+		MIT1002_01902	0.54	-1.0
2,115,066	-		MIT1002_01902	0.55	+0.4
2,115,089	+		MIT1002_01902	0.60	-1.6
2,115,096	+		MIT1002_01902	0.62	+1.1
2,115,096	+		MIT1002_01902	0.62	-1.6
2,115,096	+		MIT1002_01902	0.62	-1.1
2,115,097	-		MIT1002_01902	0.62	-0.7
2,115,104	-		MIT1002_01902	0.63	-0.0
2,115,104	-		MIT1002_01902	0.63	-1.8
2,115,104	-		MIT1002_01902	0.63	-5.3
2,115,175	-		MIT1002_01902	0.79	+0.2
2,115,194	+		MIT1002_01902	0.83	+0.4
2,115,202	-		MIT1002_01902	0.84	+0.6
2,115,204	+		MIT1002_01902	0.85	+0.1
2,115,204	+		MIT1002_01902	0.85	+0.7
2,115,238	+				-0.1
2,115,413	+				+1.1
2,115,479	-				-0.6
2,115,493	+				+0.2
2,115,661	-		MIT1002_01903	0.27	-0.8
2,115,710	+		MIT1002_01903	0.38	+0.1
2,115,712	-		MIT1002_01903	0.38	-0.9
2,115,715	+		MIT1002_01903	0.39	+0.5
2,115,716	+		MIT1002_01903	0.39	-0.8
2,115,836	-		MIT1002_01903	0.65	-0.6
2,115,890	-		MIT1002_01903	0.77	+1.2
2,115,979	-				+0.7
2,116,008	+				+1.3
2,116,075	+				+1.7
2,116,083	-				-2.7
2,116,143	+				+0.8
2,116,143	+				-0.7
2,116,151	-				+1.2
2,116,151	-				+2.3
2,116,212	-		MIT1002_01904	0.11	+1.0
2,116,212	-		MIT1002_01904	0.11	+1.0
2,116,256	-		MIT1002_01904	0.16	+1.8
2,116,381	+		MIT1002_01904	0.28	+0.2
2,116,381	+		MIT1002_01904	0.28	+0.7
2,116,381	+		MIT1002_01904	0.28	+1.0
2,116,381	+		MIT1002_01904	0.28	-1.6
2,116,381	+		MIT1002_01904	0.28	+2.0
2,116,381	+		MIT1002_01904	0.28	+0.2
2,116,381	+		MIT1002_01904	0.28	+0.7
2,116,381	+		MIT1002_01904	0.28	+1.5
2,116,389	-		MIT1002_01904	0.29	+0.9
2,116,389	-		MIT1002_01904	0.29	-2.6
2,116,389	-		MIT1002_01904	0.29	-0.1
2,116,389	-		MIT1002_01904	0.29	-1.3
2,116,389	-		MIT1002_01904	0.29	-1.2
2,116,391	+		MIT1002_01904	0.29	-0.0
2,116,391	+		MIT1002_01904	0.29	-1.1
2,116,421	-		MIT1002_01904	0.32	-0.5
2,116,466	+		MIT1002_01904	0.36	+0.1
2,116,519	+		MIT1002_01904	0.41	-0.4
2,116,519	+		MIT1002_01904	0.41	+0.2
2,116,756	-		MIT1002_01904	0.64	+0.6
2,116,838	-		MIT1002_01904	0.72	-2.0
2,116,838	-		MIT1002_01904	0.72	+0.9
2,116,838	-		MIT1002_01904	0.72	+0.4
2,116,871	+		MIT1002_01904	0.75	-0.4
2,116,934	-		MIT1002_01904	0.81	+0.2
2,116,938	+		MIT1002_01904	0.82	+0.4