Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01620

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3
1,784,196	+		MIT1002_01619	0.12	-0.2
1,784,196	-		MIT1002_01619	0.12	+0.8
1,784,313	-		MIT1002_01619	0.30	-0.4
1,784,318	-		MIT1002_01619	0.31	-2.7
1,784,329	-		MIT1002_01619	0.33	+0.1
1,784,334	+		MIT1002_01619	0.33	-2.4
1,784,337	-		MIT1002_01619	0.34	+0.1
1,784,397	-		MIT1002_01619	0.43	-1.1
1,784,419	+		MIT1002_01619	0.47	-2.8
1,784,430	+		MIT1002_01619	0.48	+0.6
1,784,459	+		MIT1002_01619	0.53	+0.1
1,784,465	-		MIT1002_01619	0.54	-0.7
1,784,467	-		MIT1002_01619	0.54	-0.0
1,784,467	-		MIT1002_01619	0.54	+0.3
1,784,467	-		MIT1002_01619	0.54	+2.0
1,784,484	-		MIT1002_01619	0.57	-2.0
1,784,500	+		MIT1002_01619	0.59	+0.0
1,784,500	+		MIT1002_01619	0.59	+1.1
1,784,500	+		MIT1002_01619	0.59	+1.2
1,784,500	+		MIT1002_01619	0.59	+0.7
1,784,500	+		MIT1002_01619	0.59	-0.3
1,784,500	+		MIT1002_01619	0.59	-0.3
1,784,500	+		MIT1002_01619	0.59	+0.0
1,784,508	-		MIT1002_01619	0.60	-1.1
1,784,508	-		MIT1002_01619	0.60	+1.0
1,784,508	-		MIT1002_01619	0.60	-0.7
1,784,508	-		MIT1002_01619	0.60	+3.2
1,784,519	-		MIT1002_01619	0.62	+0.3
1,784,526	-		MIT1002_01619	0.63	+0.8
1,784,666	-		MIT1002_01619	0.85	-0.2
1,784,849	+				+0.8
1,784,863	+				-0.9
1,784,914	-				-2.5
1,784,914	-				+0.5
1,784,992	+				+0.6
1,784,992	+				+0.8
1,785,038	+				+1.6
1,785,108	-				+0.2
1,785,176	+				-0.9
1,785,268	-				+1.6
1,785,309	+		MIT1002_01620	0.11	+0.4
1,785,331	+		MIT1002_01620	0.13	-0.0
1,785,348	+		MIT1002_01620	0.15	+0.5
1,785,393	-		MIT1002_01620	0.19	-1.0
1,785,394	+		MIT1002_01620	0.19	-0.6
1,785,420	-		MIT1002_01620	0.21	+0.0
1,785,508	-		MIT1002_01620	0.29	-2.6
1,785,516	-		MIT1002_01620	0.29	-2.4
1,785,532	+		MIT1002_01620	0.31	+0.6
1,785,540	-		MIT1002_01620	0.31	-0.8
1,785,540	-		MIT1002_01620	0.31	+0.8
1,785,540	-		MIT1002_01620	0.31	+1.0
1,785,568	+		MIT1002_01620	0.34	+0.5
1,785,626	-		MIT1002_01620	0.39	-1.6
1,785,697	+		MIT1002_01620	0.45	+0.3
1,785,705	-		MIT1002_01620	0.46	+0.6
1,785,705	-		MIT1002_01620	0.46	-1.1
1,785,734	+		MIT1002_01620	0.48	+0.6
1,785,742	+		MIT1002_01620	0.49	+0.0
1,785,744	+		MIT1002_01620	0.49	-0.3
1,785,754	-		MIT1002_01620	0.50	-1.0
1,785,754	-		MIT1002_01620	0.50	+0.3
1,785,754	-		MIT1002_01620	0.50	+0.7
1,785,755	-		MIT1002_01620	0.50	+0.6
1,785,815	+		MIT1002_01620	0.56	-2.3
1,785,965	-		MIT1002_01620	0.69	-0.9
1,785,968	+		MIT1002_01620	0.69	-0.1
1,786,095	-		MIT1002_01620	0.80	-1.2
1,786,191	+		MIT1002_01620	0.89	+0.0
1,786,191	+		MIT1002_01620	0.89	-0.0
1,786,199	-		MIT1002_01620	0.89	+0.7
1,786,199	-		MIT1002_01620	0.89	-1.0
1,786,199	-		MIT1002_01620	0.89	+1.0
1,786,290	-				+0.6
1,786,439	+				-0.5
1,786,515	-		MIT1002_01621	0.14	+1.4
1,786,593	+		MIT1002_01621	0.20	+0.0
1,786,728	-		MIT1002_01621	0.30	-1.4
1,786,827	-		MIT1002_01621	0.38	+1.1
1,786,854	-		MIT1002_01621	0.40	-2.1
1,786,934	+		MIT1002_01621	0.46	-0.2
1,786,971	-		MIT1002_01621	0.49	-0.4
1,787,044	-		MIT1002_01621	0.54	+0.9
1,787,101	+		MIT1002_01621	0.58	+1.1
1,787,209	-		MIT1002_01621	0.66	-0.4
1,787,308	+		MIT1002_01621	0.74	+0.6
1,787,311	-		MIT1002_01621	0.74	-0.5