Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_01358

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment C, time point 3
1,501,436	+				-0.3
1,501,558	+				-0.1
1,501,609	-				-0.1
1,501,609	-				+0.5
1,501,672	+				-1.2
1,501,682	+				+0.6
1,501,689	+				+0.3
1,502,051	-		MIT1002_01357	0.64	-0.5
1,502,053	+		MIT1002_01357	0.64	-0.4
1,502,072	+		MIT1002_01357	0.68	+1.2
1,502,090	-		MIT1002_01357	0.72	-0.6
1,502,257	+				-0.4
1,502,336	+				-1.1
1,502,336	+				+1.0
1,502,336	+				+0.2
1,502,344	-				-2.3
1,502,397	-		MIT1002_01358	0.13	+1.7
1,502,453	+		MIT1002_01358	0.26	+0.3
1,502,593	+		MIT1002_01358	0.60	-0.2
1,502,615	-		MIT1002_01358	0.65	-0.5
1,502,739	+				+1.4
1,502,755	+				+0.4
1,502,761	+				+1.9
1,502,784	-				-1.3
1,502,785	+				+0.4
1,502,803	+				-0.9
1,502,821	-				+0.8
1,502,943	+				-0.1
1,502,951	-				+0.4
1,503,062	-				+1.2
1,503,095	-				-0.8
1,503,095	-				+0.4
1,503,358	+		MIT1002_01359	0.16	-1.6
1,503,430	-		MIT1002_01359	0.19	+4.0
1,503,496	-		MIT1002_01359	0.21	+0.3
1,503,557	-		MIT1002_01359	0.23	+0.6
1,503,595	-		MIT1002_01359	0.24	-1.3
1,503,634	-		MIT1002_01359	0.25	-0.7
1,503,689	-		MIT1002_01359	0.27	-3.1
1,503,689	-		MIT1002_01359	0.27	-0.4
1,503,691	+		MIT1002_01359	0.27	+0.2
1,503,691	+		MIT1002_01359	0.27	+0.8
1,503,698	+		MIT1002_01359	0.27	-0.2
1,503,699	-		MIT1002_01359	0.27	-0.8