Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS40270 and QEN71_RS40275 are separated by 571 nucleotides QEN71_RS40275 and QEN71_RS40280 are separated by 647 nucleotides
QEN71_RS40270: QEN71_RS40270 - amino acid ABC transporter permease, at 117,487 to 118,407
_RS40270
QEN71_RS40275: QEN71_RS40275 - transporter substrate-binding domain-containing protein, at 118,979 to 119,782
_RS40275
QEN71_RS40280: QEN71_RS40280 - amino acid ABC transporter ATP-binding protein, at 120,430 to 121,209
_RS40280
Position (kb) 118
119
120 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 118.084 kb on - strand, within QEN71_RS40270 at 118.084 kb on - strand, within QEN71_RS40270 at 118.192 kb on + strand, within QEN71_RS40270 at 118.193 kb on - strand, within QEN71_RS40270 at 118.235 kb on + strand, within QEN71_RS40270 at 118.236 kb on - strand, within QEN71_RS40270 at 118.248 kb on + strand, within QEN71_RS40270 at 118.249 kb on - strand, within QEN71_RS40270 at 118.458 kb on + strand at 118.459 kb on - strand at 118.459 kb on - strand at 118.474 kb on + strand at 118.474 kb on + strand at 118.475 kb on - strand at 118.517 kb on - strand at 118.533 kb on + strand at 118.542 kb on + strand at 118.572 kb on + strand at 118.572 kb on + strand at 118.572 kb on + strand at 118.576 kb on + strand at 118.722 kb on - strand at 118.760 kb on + strand at 118.789 kb on + strand at 118.790 kb on - strand at 118.833 kb on + strand at 118.836 kb on + strand at 118.837 kb on - strand at 118.837 kb on - strand at 118.872 kb on - strand at 118.980 kb on + strand at 118.989 kb on + strand at 118.989 kb on + strand at 118.990 kb on - strand at 118.990 kb on - strand at 119.127 kb on + strand, within QEN71_RS40275 at 119.241 kb on + strand, within QEN71_RS40275 at 119.242 kb on - strand, within QEN71_RS40275 at 119.242 kb on - strand, within QEN71_RS40275 at 119.262 kb on + strand, within QEN71_RS40275 at 119.262 kb on + strand, within QEN71_RS40275 at 119.263 kb on - strand, within QEN71_RS40275 at 119.295 kb on + strand, within QEN71_RS40275 at 119.296 kb on - strand, within QEN71_RS40275 at 119.347 kb on - strand, within QEN71_RS40275 at 119.387 kb on - strand, within QEN71_RS40275 at 119.387 kb on - strand, within QEN71_RS40275 at 119.425 kb on + strand, within QEN71_RS40275 at 119.426 kb on - strand, within QEN71_RS40275 at 119.455 kb on - strand, within QEN71_RS40275 at 119.458 kb on - strand, within QEN71_RS40275 at 119.474 kb on + strand, within QEN71_RS40275 at 119.661 kb on + strand, within QEN71_RS40275 at 119.662 kb on - strand, within QEN71_RS40275 at 119.785 kb on + strand at 119.846 kb on + strand at 119.986 kb on + strand at 120.086 kb on - strand at 120.182 kb on - strand at 120.239 kb on - strand at 120.241 kb on + strand at 120.254 kb on - strand at 120.329 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 118,084 - QEN71_RS40270 0.65 -1.0 118,084 - QEN71_RS40270 0.65 -0.2 118,192 + QEN71_RS40270 0.77 +0.3 118,193 - QEN71_RS40270 0.77 -1.5 118,235 + QEN71_RS40270 0.81 +0.3 118,236 - QEN71_RS40270 0.81 -0.4 118,248 + QEN71_RS40270 0.83 +0.1 118,249 - QEN71_RS40270 0.83 +1.0 118,458 + -0.4 118,459 - -0.1 118,459 - +1.8 118,474 + +0.7 118,474 + -0.8 118,475 - -0.5 118,517 - +0.5 118,533 + -0.7 118,542 + +0.7 118,572 + +0.2 118,572 + +2.3 118,572 + -1.6 118,576 + -0.4 118,722 - -0.2 118,760 + +0.0 118,789 + -0.7 118,790 - -2.6 118,833 + +0.1 118,836 + -0.2 118,837 - +0.4 118,837 - +1.5 118,872 - +1.4 118,980 + -0.2 118,989 + -0.6 118,989 + +0.1 118,990 - -0.9 118,990 - -0.5 119,127 + QEN71_RS40275 0.18 +0.8 119,241 + QEN71_RS40275 0.33 -0.3 119,242 - QEN71_RS40275 0.33 -0.3 119,242 - QEN71_RS40275 0.33 +0.7 119,262 + QEN71_RS40275 0.35 +1.1 119,262 + QEN71_RS40275 0.35 -2.0 119,263 - QEN71_RS40275 0.35 -1.3 119,295 + QEN71_RS40275 0.39 +1.4 119,296 - QEN71_RS40275 0.39 +0.5 119,347 - QEN71_RS40275 0.46 +0.9 119,387 - QEN71_RS40275 0.51 +0.1 119,387 - QEN71_RS40275 0.51 -0.6 119,425 + QEN71_RS40275 0.55 -1.7 119,426 - QEN71_RS40275 0.56 +0.0 119,455 - QEN71_RS40275 0.59 +1.3 119,458 - QEN71_RS40275 0.60 -0.3 119,474 + QEN71_RS40275 0.62 -0.5 119,661 + QEN71_RS40275 0.85 -0.4 119,662 - QEN71_RS40275 0.85 -2.9 119,785 + +0.4 119,846 + -0.2 119,986 + -2.4 120,086 - +1.6 120,182 - +0.8 120,239 - -0.3 120,241 + +1.8 120,254 - -0.5 120,329 + -0.4
Or see this region's nucleotide sequence