Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS34155 and QEN71_RS34160 are separated by 138 nucleotides QEN71_RS34160 and QEN71_RS34165 are separated by 188 nucleotides
QEN71_RS34155: QEN71_RS34155 - heterodisulfide reductase-related iron-sulfur binding cluster, at 978,521 to 980,683
_RS34155
QEN71_RS34160: QEN71_RS34160 - FAD-dependent oxidoreductase, at 980,822 to 983,014
_RS34160
QEN71_RS34165: QEN71_RS34165 - aminomethyltransferase family protein, at 983,203 to 984,315
_RS34165
Position (kb) 980
981
982
983
984 Strain fitness (log2 ratio) -1
0
1
2 at 979.887 kb on + strand, within QEN71_RS34155 at 980.241 kb on + strand, within QEN71_RS34155 at 980.241 kb on + strand, within QEN71_RS34155 at 980.242 kb on - strand, within QEN71_RS34155 at 980.242 kb on - strand, within QEN71_RS34155 at 980.301 kb on + strand, within QEN71_RS34155 at 980.352 kb on + strand, within QEN71_RS34155 at 980.599 kb on - strand at 980.607 kb on - strand at 980.823 kb on + strand at 980.832 kb on + strand at 980.895 kb on + strand at 980.896 kb on - strand at 980.896 kb on - strand at 981.166 kb on - strand, within QEN71_RS34160 at 981.292 kb on - strand, within QEN71_RS34160 at 981.312 kb on + strand, within QEN71_RS34160 at 981.313 kb on - strand, within QEN71_RS34160 at 981.397 kb on - strand, within QEN71_RS34160 at 981.631 kb on + strand, within QEN71_RS34160 at 981.725 kb on - strand, within QEN71_RS34160 at 981.959 kb on - strand, within QEN71_RS34160 at 982.073 kb on - strand, within QEN71_RS34160 at 982.191 kb on + strand, within QEN71_RS34160 at 982.192 kb on - strand, within QEN71_RS34160 at 982.192 kb on - strand, within QEN71_RS34160 at 982.461 kb on + strand, within QEN71_RS34160 at 982.491 kb on + strand, within QEN71_RS34160 at 982.492 kb on - strand, within QEN71_RS34160 at 982.492 kb on - strand, within QEN71_RS34160 at 982.507 kb on - strand, within QEN71_RS34160 at 982.507 kb on - strand, within QEN71_RS34160 at 982.512 kb on + strand, within QEN71_RS34160 at 982.513 kb on - strand, within QEN71_RS34160 at 982.513 kb on - strand, within QEN71_RS34160 at 982.560 kb on + strand, within QEN71_RS34160 at 982.560 kb on + strand, within QEN71_RS34160 at 982.561 kb on - strand, within QEN71_RS34160 at 982.561 kb on - strand, within QEN71_RS34160 at 982.673 kb on - strand, within QEN71_RS34160 at 982.834 kb on - strand at 982.938 kb on + strand at 983.041 kb on - strand at 983.412 kb on - strand, within QEN71_RS34165 at 983.412 kb on - strand, within QEN71_RS34165 at 983.600 kb on + strand, within QEN71_RS34165 at 984.003 kb on - strand, within QEN71_RS34165
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 979,887 + QEN71_RS34155 0.63 -0.4 980,241 + QEN71_RS34155 0.80 +1.2 980,241 + QEN71_RS34155 0.80 -0.0 980,242 - QEN71_RS34155 0.80 -0.7 980,242 - QEN71_RS34155 0.80 +1.7 980,301 + QEN71_RS34155 0.82 +0.4 980,352 + QEN71_RS34155 0.85 +0.7 980,599 - -0.6 980,607 - +0.1 980,823 + +0.9 980,832 + -0.1 980,895 + -0.4 980,896 - -0.6 980,896 - +0.8 981,166 - QEN71_RS34160 0.16 -0.9 981,292 - QEN71_RS34160 0.21 -1.3 981,312 + QEN71_RS34160 0.22 +1.9 981,313 - QEN71_RS34160 0.22 +0.5 981,397 - QEN71_RS34160 0.26 -0.1 981,631 + QEN71_RS34160 0.37 +1.1 981,725 - QEN71_RS34160 0.41 -0.1 981,959 - QEN71_RS34160 0.52 -0.5 982,073 - QEN71_RS34160 0.57 -0.1 982,191 + QEN71_RS34160 0.62 +0.6 982,192 - QEN71_RS34160 0.62 +0.2 982,192 - QEN71_RS34160 0.62 -0.7 982,461 + QEN71_RS34160 0.75 -0.9 982,491 + QEN71_RS34160 0.76 -0.7 982,492 - QEN71_RS34160 0.76 +0.1 982,492 - QEN71_RS34160 0.76 +0.4 982,507 - QEN71_RS34160 0.77 +0.5 982,507 - QEN71_RS34160 0.77 -0.1 982,512 + QEN71_RS34160 0.77 -1.1 982,513 - QEN71_RS34160 0.77 +0.2 982,513 - QEN71_RS34160 0.77 -0.5 982,560 + QEN71_RS34160 0.79 +0.6 982,560 + QEN71_RS34160 0.79 +1.9 982,561 - QEN71_RS34160 0.79 -0.4 982,561 - QEN71_RS34160 0.79 -0.4 982,673 - QEN71_RS34160 0.84 +0.3 982,834 - +0.3 982,938 + -0.0 983,041 - +0.1 983,412 - QEN71_RS34165 0.19 +0.5 983,412 - QEN71_RS34165 0.19 -0.5 983,600 + QEN71_RS34165 0.36 -1.1 984,003 - QEN71_RS34165 0.72 +0.6
Or see this region's nucleotide sequence