Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS31845 and QEN71_RS31850 are separated by 21 nucleotides QEN71_RS31850 and QEN71_RS31855 are separated by 184 nucleotides QEN71_RS31855 and QEN71_RS31860 are separated by 125 nucleotides
QEN71_RS31845: QEN71_RS31845 - pseudouridine-5'-phosphate glycosidase, at 497,630 to 498,556
_RS31845
QEN71_RS31850: QEN71_RS31850 - molybdopterin-dependent oxidoreductase, at 498,578 to 499,174
_RS31850
QEN71_RS31855: QEN71_RS31855 - cupin domain-containing protein, at 499,359 to 499,772
_RS31855
QEN71_RS31860: QEN71_RS31860 - alpha/beta hydrolase, at 499,898 to 500,749
_RS31860
Position (kb) 498
499
500 Strain fitness (log2 ratio) -2
-1
0
1 at 497.578 kb on - strand at 497.595 kb on + strand at 497.595 kb on + strand at 497.595 kb on + strand at 497.596 kb on - strand at 497.596 kb on - strand at 497.596 kb on - strand at 498.212 kb on + strand, within QEN71_RS31845 at 498.212 kb on + strand, within QEN71_RS31845 at 498.212 kb on + strand, within QEN71_RS31845 at 498.213 kb on - strand, within QEN71_RS31845 at 498.213 kb on - strand, within QEN71_RS31845 at 498.213 kb on - strand, within QEN71_RS31845 at 498.554 kb on + strand at 498.579 kb on + strand at 498.579 kb on + strand at 498.579 kb on + strand at 498.590 kb on + strand at 498.591 kb on - strand at 498.591 kb on - strand at 498.678 kb on + strand, within QEN71_RS31850 at 498.679 kb on - strand, within QEN71_RS31850 at 498.679 kb on - strand, within QEN71_RS31850 at 498.690 kb on - strand, within QEN71_RS31850 at 498.820 kb on + strand, within QEN71_RS31850 at 498.821 kb on - strand, within QEN71_RS31850 at 498.821 kb on - strand, within QEN71_RS31850 at 498.854 kb on + strand, within QEN71_RS31850 at 498.855 kb on - strand, within QEN71_RS31850 at 498.855 kb on - strand, within QEN71_RS31850 at 498.878 kb on + strand, within QEN71_RS31850 at 498.901 kb on - strand, within QEN71_RS31850 at 498.901 kb on - strand, within QEN71_RS31850 at 498.998 kb on + strand, within QEN71_RS31850 at 498.999 kb on - strand, within QEN71_RS31850 at 498.999 kb on - strand, within QEN71_RS31850 at 499.193 kb on + strand at 499.193 kb on + strand at 499.204 kb on + strand at 499.205 kb on - strand at 499.215 kb on + strand at 499.216 kb on - strand at 499.216 kb on - strand at 499.218 kb on - strand at 499.218 kb on - strand at 499.218 kb on - strand at 499.233 kb on - strand at 499.314 kb on - strand at 499.358 kb on + strand at 499.359 kb on - strand at 499.359 kb on - strand at 499.443 kb on + strand, within QEN71_RS31855 at 499.444 kb on - strand, within QEN71_RS31855 at 499.560 kb on - strand, within QEN71_RS31855 at 499.563 kb on + strand, within QEN71_RS31855 at 499.563 kb on + strand, within QEN71_RS31855 at 499.563 kb on + strand, within QEN71_RS31855 at 499.563 kb on + strand, within QEN71_RS31855 at 499.563 kb on + strand, within QEN71_RS31855 at 499.563 kb on + strand, within QEN71_RS31855 at 499.563 kb on + strand, within QEN71_RS31855 at 499.563 kb on + strand, within QEN71_RS31855 at 499.564 kb on - strand, within QEN71_RS31855 at 499.564 kb on - strand, within QEN71_RS31855 at 499.564 kb on - strand, within QEN71_RS31855 at 499.564 kb on - strand, within QEN71_RS31855 at 499.564 kb on - strand, within QEN71_RS31855 at 499.564 kb on - strand, within QEN71_RS31855 at 499.564 kb on - strand, within QEN71_RS31855 at 499.564 kb on - strand, within QEN71_RS31855 at 499.564 kb on - strand, within QEN71_RS31855 at 499.593 kb on + strand, within QEN71_RS31855 at 499.752 kb on + strand at 499.752 kb on + strand at 499.753 kb on - strand at 499.753 kb on - strand at 499.753 kb on - strand at 499.828 kb on - strand at 499.859 kb on + strand at 499.859 kb on + strand at 499.859 kb on + strand at 499.859 kb on + strand at 499.859 kb on + strand at 499.859 kb on + strand at 499.859 kb on + strand at 499.860 kb on - strand at 499.860 kb on - strand at 499.860 kb on - strand at 499.860 kb on - strand at 499.862 kb on + strand at 499.862 kb on + strand at 499.863 kb on - strand at 499.876 kb on + strand at 499.876 kb on + strand at 499.877 kb on - strand at 499.979 kb on + strand at 499.979 kb on + strand at 499.980 kb on - strand at 499.980 kb on - strand at 499.980 kb on - strand at 500.109 kb on - strand, within QEN71_RS31860 at 500.109 kb on - strand, within QEN71_RS31860 at 500.109 kb on - strand, within QEN71_RS31860
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 497,578 - -0.8 497,595 + -0.1 497,595 + -0.3 497,595 + +0.5 497,596 - +0.8 497,596 - +0.5 497,596 - -0.4 498,212 + QEN71_RS31845 0.63 +0.0 498,212 + QEN71_RS31845 0.63 -2.0 498,212 + QEN71_RS31845 0.63 +0.1 498,213 - QEN71_RS31845 0.63 +0.3 498,213 - QEN71_RS31845 0.63 +0.5 498,213 - QEN71_RS31845 0.63 +1.4 498,554 + -0.5 498,579 + -0.1 498,579 + -0.4 498,579 + -0.5 498,590 + +0.2 498,591 - -0.5 498,591 - +0.2 498,678 + QEN71_RS31850 0.17 -0.3 498,679 - QEN71_RS31850 0.17 +0.0 498,679 - QEN71_RS31850 0.17 -0.7 498,690 - QEN71_RS31850 0.19 +1.0 498,820 + QEN71_RS31850 0.41 -0.2 498,821 - QEN71_RS31850 0.41 +0.4 498,821 - QEN71_RS31850 0.41 -1.6 498,854 + QEN71_RS31850 0.46 +0.5 498,855 - QEN71_RS31850 0.46 -0.2 498,855 - QEN71_RS31850 0.46 -0.6 498,878 + QEN71_RS31850 0.50 +1.1 498,901 - QEN71_RS31850 0.54 -0.2 498,901 - QEN71_RS31850 0.54 -0.9 498,998 + QEN71_RS31850 0.70 -0.7 498,999 - QEN71_RS31850 0.71 -1.4 498,999 - QEN71_RS31850 0.71 +1.7 499,193 + -0.4 499,193 + -0.3 499,204 + +0.5 499,205 - +1.1 499,215 + +0.6 499,216 - +0.1 499,216 - -0.8 499,218 - -2.1 499,218 - -0.0 499,218 - -0.1 499,233 - +0.3 499,314 - +0.6 499,358 + -0.6 499,359 - -0.7 499,359 - +0.4 499,443 + QEN71_RS31855 0.20 -0.7 499,444 - QEN71_RS31855 0.21 -0.5 499,560 - QEN71_RS31855 0.49 -0.9 499,563 + QEN71_RS31855 0.49 +0.1 499,563 + QEN71_RS31855 0.49 -0.0 499,563 + QEN71_RS31855 0.49 -0.2 499,563 + QEN71_RS31855 0.49 -1.0 499,563 + QEN71_RS31855 0.49 -0.0 499,563 + QEN71_RS31855 0.49 -0.7 499,563 + QEN71_RS31855 0.49 +1.5 499,563 + QEN71_RS31855 0.49 -0.6 499,564 - QEN71_RS31855 0.50 -1.2 499,564 - QEN71_RS31855 0.50 -0.5 499,564 - QEN71_RS31855 0.50 +0.1 499,564 - QEN71_RS31855 0.50 -1.3 499,564 - QEN71_RS31855 0.50 +0.3 499,564 - QEN71_RS31855 0.50 -0.6 499,564 - QEN71_RS31855 0.50 +1.2 499,564 - QEN71_RS31855 0.50 +0.7 499,564 - QEN71_RS31855 0.50 -0.6 499,593 + QEN71_RS31855 0.57 +0.5 499,752 + +0.8 499,752 + -0.6 499,753 - +0.3 499,753 - -0.6 499,753 - -1.3 499,828 - -1.1 499,859 + -0.3 499,859 + -2.5 499,859 + -0.4 499,859 + +1.1 499,859 + +0.5 499,859 + +1.4 499,859 + -0.7 499,860 - -0.8 499,860 - -0.5 499,860 - -0.8 499,860 - -1.3 499,862 + -1.5 499,862 + +0.5 499,863 - +0.4 499,876 + -0.6 499,876 + -1.7 499,877 - -0.1 499,979 + +0.7 499,979 + +0.4 499,980 - -0.3 499,980 - +0.0 499,980 - -0.3 500,109 - QEN71_RS31860 0.25 -0.1 500,109 - QEN71_RS31860 0.25 -0.2 500,109 - QEN71_RS31860 0.25 +0.2
Or see this region's nucleotide sequence