Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS23660 and QEN71_RS23665 are separated by 88 nucleotides QEN71_RS23665 and QEN71_RS23670 are separated by 180 nucleotides QEN71_RS23670 and QEN71_RS23675 are separated by 97 nucleotides QEN71_RS23675 and QEN71_RS23680 are separated by 194 nucleotides
QEN71_RS23660: QEN71_RS23660 - AraC family transcriptional regulator, at 5,277,976 to 5,278,791
_RS23660
QEN71_RS23665: QEN71_RS23665 - LysE family transporter, at 5,278,880 to 5,279,530
_RS23665
QEN71_RS23670: QEN71_RS23670 - DUF1328 domain-containing protein, at 5,279,711 to 5,279,872
_RS23670
QEN71_RS23675: QEN71_RS23675 - hypothetical protein, at 5,279,970 to 5,280,173
_RS23675
QEN71_RS23680: QEN71_RS23680 - TetR/AcrR family transcriptional regulator, at 5,280,368 to 5,281,039
_RS23680
Position (kb) 5279
5280 Strain fitness (log2 ratio) -2
-1
0
1
2 at 5278.789 kb on + strand at 5278.790 kb on - strand at 5278.790 kb on - strand at 5278.790 kb on - strand at 5278.830 kb on + strand at 5278.830 kb on + strand at 5278.830 kb on + strand at 5278.830 kb on + strand at 5278.831 kb on - strand at 5278.831 kb on - strand at 5278.831 kb on - strand at 5278.831 kb on - strand at 5279.092 kb on - strand, within QEN71_RS23665 at 5279.126 kb on + strand, within QEN71_RS23665 at 5279.126 kb on + strand, within QEN71_RS23665 at 5279.126 kb on + strand, within QEN71_RS23665 at 5279.126 kb on + strand, within QEN71_RS23665 at 5279.126 kb on + strand, within QEN71_RS23665 at 5279.126 kb on + strand, within QEN71_RS23665 at 5279.135 kb on + strand, within QEN71_RS23665 at 5279.135 kb on + strand, within QEN71_RS23665 at 5279.135 kb on + strand, within QEN71_RS23665 at 5279.136 kb on - strand, within QEN71_RS23665 at 5279.136 kb on - strand, within QEN71_RS23665 at 5279.136 kb on - strand, within QEN71_RS23665 at 5279.288 kb on + strand, within QEN71_RS23665 at 5279.288 kb on + strand, within QEN71_RS23665 at 5279.288 kb on + strand, within QEN71_RS23665 at 5279.288 kb on + strand, within QEN71_RS23665 at 5279.288 kb on + strand, within QEN71_RS23665 at 5279.288 kb on + strand, within QEN71_RS23665 at 5279.288 kb on + strand, within QEN71_RS23665 at 5279.288 kb on + strand, within QEN71_RS23665 at 5279.289 kb on - strand, within QEN71_RS23665 at 5279.289 kb on - strand, within QEN71_RS23665 at 5279.289 kb on - strand, within QEN71_RS23665 at 5279.289 kb on - strand, within QEN71_RS23665 at 5279.289 kb on - strand, within QEN71_RS23665 at 5279.289 kb on - strand, within QEN71_RS23665 at 5279.289 kb on - strand, within QEN71_RS23665 at 5279.394 kb on + strand, within QEN71_RS23665 at 5279.443 kb on + strand, within QEN71_RS23665 at 5279.443 kb on + strand, within QEN71_RS23665 at 5279.476 kb on - strand at 5279.476 kb on - strand at 5279.526 kb on + strand at 5279.526 kb on + strand at 5279.544 kb on + strand at 5279.544 kb on + strand at 5279.544 kb on + strand at 5279.544 kb on + strand at 5279.544 kb on + strand at 5279.544 kb on + strand at 5279.544 kb on + strand at 5279.544 kb on + strand at 5279.544 kb on + strand at 5279.544 kb on + strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.545 kb on - strand at 5279.593 kb on + strand at 5279.593 kb on + strand at 5279.594 kb on - strand at 5279.721 kb on - strand at 5279.721 kb on - strand at 5279.721 kb on - strand at 5279.799 kb on + strand, within QEN71_RS23670 at 5279.799 kb on + strand, within QEN71_RS23670 at 5279.800 kb on - strand, within QEN71_RS23670 at 5279.818 kb on + strand, within QEN71_RS23670 at 5279.818 kb on + strand, within QEN71_RS23670 at 5279.818 kb on + strand, within QEN71_RS23670 at 5279.819 kb on - strand, within QEN71_RS23670 at 5279.819 kb on - strand, within QEN71_RS23670 at 5279.819 kb on - strand, within QEN71_RS23670 at 5279.824 kb on + strand, within QEN71_RS23670 at 5279.824 kb on + strand, within QEN71_RS23670 at 5279.825 kb on - strand, within QEN71_RS23670 at 5279.825 kb on - strand, within QEN71_RS23670 at 5279.938 kb on + strand at 5279.938 kb on + strand at 5279.938 kb on + strand at 5279.938 kb on + strand at 5279.938 kb on + strand at 5279.939 kb on - strand at 5279.939 kb on - strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.957 kb on + strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.958 kb on - strand at 5279.999 kb on + strand, within QEN71_RS23675 at 5280.085 kb on + strand, within QEN71_RS23675 at 5280.085 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.144 kb on + strand, within QEN71_RS23675 at 5280.145 kb on - strand, within QEN71_RS23675 at 5280.145 kb on - strand, within QEN71_RS23675 at 5280.145 kb on - strand, within QEN71_RS23675 at 5280.145 kb on - strand, within QEN71_RS23675 at 5280.145 kb on - strand, within QEN71_RS23675 at 5280.145 kb on - strand, within QEN71_RS23675 at 5280.145 kb on - strand, within QEN71_RS23675 at 5280.145 kb on - strand, within QEN71_RS23675 at 5280.145 kb on - strand, within QEN71_RS23675 at 5280.145 kb on - strand, within QEN71_RS23675 at 5280.145 kb on - strand, within QEN71_RS23675 at 5280.145 kb on - strand, within QEN71_RS23675 at 5280.146 kb on + strand, within QEN71_RS23675 at 5280.147 kb on - strand, within QEN71_RS23675 at 5280.238 kb on + strand at 5280.238 kb on + strand at 5280.238 kb on + strand at 5280.238 kb on + strand at 5280.239 kb on - strand at 5280.293 kb on + strand at 5280.293 kb on + strand at 5280.293 kb on + strand at 5280.293 kb on + strand at 5280.293 kb on + strand at 5280.294 kb on - strand at 5280.294 kb on - strand at 5280.294 kb on - strand at 5280.294 kb on - strand at 5280.294 kb on - strand at 5280.294 kb on - strand at 5280.335 kb on - strand at 5280.379 kb on + strand at 5280.429 kb on + strand at 5280.429 kb on + strand at 5280.429 kb on + strand at 5280.429 kb on + strand at 5280.429 kb on + strand at 5280.429 kb on + strand at 5280.429 kb on + strand at 5280.429 kb on + strand at 5280.429 kb on + strand at 5280.430 kb on - strand at 5280.430 kb on - strand at 5280.430 kb on - strand at 5280.489 kb on + strand, within QEN71_RS23680 at 5280.490 kb on - strand, within QEN71_RS23680 at 5280.490 kb on - strand, within QEN71_RS23680 at 5280.490 kb on - strand, within QEN71_RS23680 at 5280.490 kb on - strand, within QEN71_RS23680 at 5280.627 kb on + strand, within QEN71_RS23680 at 5280.627 kb on + strand, within QEN71_RS23680 at 5280.628 kb on - strand, within QEN71_RS23680 at 5280.628 kb on - strand, within QEN71_RS23680 at 5280.696 kb on + strand, within QEN71_RS23680 at 5280.696 kb on + strand, within QEN71_RS23680 at 5280.696 kb on + strand, within QEN71_RS23680 at 5280.867 kb on + strand, within QEN71_RS23680 at 5280.867 kb on + strand, within QEN71_RS23680 at 5280.868 kb on - strand, within QEN71_RS23680
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 5,278,789 + +0.3 5,278,790 - -0.6 5,278,790 - -0.7 5,278,790 - -0.2 5,278,830 + +0.6 5,278,830 + +0.5 5,278,830 + -0.7 5,278,830 + -2.2 5,278,831 - -1.0 5,278,831 - +0.0 5,278,831 - -1.1 5,278,831 - +0.7 5,279,092 - QEN71_RS23665 0.33 -0.3 5,279,126 + QEN71_RS23665 0.38 -0.8 5,279,126 + QEN71_RS23665 0.38 +0.6 5,279,126 + QEN71_RS23665 0.38 +0.1 5,279,126 + QEN71_RS23665 0.38 +0.4 5,279,126 + QEN71_RS23665 0.38 -0.3 5,279,126 + QEN71_RS23665 0.38 +0.1 5,279,135 + QEN71_RS23665 0.39 -0.3 5,279,135 + QEN71_RS23665 0.39 -0.9 5,279,135 + QEN71_RS23665 0.39 +0.4 5,279,136 - QEN71_RS23665 0.39 +0.4 5,279,136 - QEN71_RS23665 0.39 -0.4 5,279,136 - QEN71_RS23665 0.39 -1.4 5,279,288 + QEN71_RS23665 0.63 -1.6 5,279,288 + QEN71_RS23665 0.63 +0.1 5,279,288 + QEN71_RS23665 0.63 +1.1 5,279,288 + QEN71_RS23665 0.63 -1.6 5,279,288 + QEN71_RS23665 0.63 +0.0 5,279,288 + QEN71_RS23665 0.63 +0.3 5,279,288 + QEN71_RS23665 0.63 -0.6 5,279,288 + QEN71_RS23665 0.63 -2.0 5,279,289 - QEN71_RS23665 0.63 +0.5 5,279,289 - QEN71_RS23665 0.63 +0.7 5,279,289 - QEN71_RS23665 0.63 -0.0 5,279,289 - QEN71_RS23665 0.63 -0.4 5,279,289 - QEN71_RS23665 0.63 -0.6 5,279,289 - QEN71_RS23665 0.63 -0.8 5,279,289 - QEN71_RS23665 0.63 -0.2 5,279,394 + QEN71_RS23665 0.79 -1.4 5,279,443 + QEN71_RS23665 0.86 +0.7 5,279,443 + QEN71_RS23665 0.86 -0.3 5,279,476 - +0.6 5,279,476 - +0.6 5,279,526 + -0.3 5,279,526 + -0.8 5,279,544 + +0.6 5,279,544 + +1.0 5,279,544 + +0.1 5,279,544 + +0.4 5,279,544 + +0.7 5,279,544 + +2.6 5,279,544 + +2.0 5,279,544 + +0.3 5,279,544 + -0.6 5,279,544 + +0.5 5,279,545 - -1.2 5,279,545 - +0.3 5,279,545 - +0.4 5,279,545 - -1.2 5,279,545 - +0.8 5,279,545 - -1.4 5,279,545 - +0.4 5,279,545 - -0.4 5,279,545 - -0.5 5,279,545 - -0.2 5,279,545 - +1.8 5,279,545 - +1.0 5,279,545 - -0.6 5,279,545 - -0.2 5,279,545 - -0.6 5,279,545 - -0.8 5,279,545 - +0.7 5,279,593 + +1.3 5,279,593 + -1.3 5,279,594 - +0.0 5,279,721 - -2.1 5,279,721 - +0.0 5,279,721 - -0.7 5,279,799 + QEN71_RS23670 0.54 +1.3 5,279,799 + QEN71_RS23670 0.54 +0.6 5,279,800 - QEN71_RS23670 0.55 -0.2 5,279,818 + QEN71_RS23670 0.66 -0.6 5,279,818 + QEN71_RS23670 0.66 -0.8 5,279,818 + QEN71_RS23670 0.66 -0.3 5,279,819 - QEN71_RS23670 0.67 +0.9 5,279,819 - QEN71_RS23670 0.67 -0.6 5,279,819 - QEN71_RS23670 0.67 +0.5 5,279,824 + QEN71_RS23670 0.70 -0.2 5,279,824 + QEN71_RS23670 0.70 -0.6 5,279,825 - QEN71_RS23670 0.70 +0.8 5,279,825 - QEN71_RS23670 0.70 -0.6 5,279,938 + -1.3 5,279,938 + +0.1 5,279,938 + +0.8 5,279,938 + -0.3 5,279,938 + -0.6 5,279,939 - +0.9 5,279,939 - -0.3 5,279,957 + -1.2 5,279,957 + +0.3 5,279,957 + +0.1 5,279,957 + +0.0 5,279,957 + -0.2 5,279,957 + -0.7 5,279,957 + +0.3 5,279,957 + +0.6 5,279,957 + +0.1 5,279,957 + +0.0 5,279,957 + +0.0 5,279,957 + -0.7 5,279,957 + -1.8 5,279,957 + +0.4 5,279,958 - -0.9 5,279,958 - -1.5 5,279,958 - -0.2 5,279,958 - -0.1 5,279,958 - -0.6 5,279,958 - +0.5 5,279,958 - -0.5 5,279,958 - +1.0 5,279,958 - -0.2 5,279,958 - -0.0 5,279,958 - -0.6 5,279,958 - +1.1 5,279,958 - +1.0 5,279,958 - -0.4 5,279,999 + QEN71_RS23675 0.14 +0.3 5,280,085 + QEN71_RS23675 0.56 -0.9 5,280,085 + QEN71_RS23675 0.56 -0.6 5,280,144 + QEN71_RS23675 0.85 -0.5 5,280,144 + QEN71_RS23675 0.85 -1.3 5,280,144 + QEN71_RS23675 0.85 -1.1 5,280,144 + QEN71_RS23675 0.85 -0.6 5,280,144 + QEN71_RS23675 0.85 -1.4 5,280,144 + QEN71_RS23675 0.85 +0.7 5,280,144 + QEN71_RS23675 0.85 -1.0 5,280,144 + QEN71_RS23675 0.85 +0.1 5,280,144 + QEN71_RS23675 0.85 -0.2 5,280,144 + QEN71_RS23675 0.85 +0.4 5,280,144 + QEN71_RS23675 0.85 +1.0 5,280,144 + QEN71_RS23675 0.85 -0.6 5,280,144 + QEN71_RS23675 0.85 +1.5 5,280,145 - QEN71_RS23675 0.86 +0.1 5,280,145 - QEN71_RS23675 0.86 -0.7 5,280,145 - QEN71_RS23675 0.86 -0.3 5,280,145 - QEN71_RS23675 0.86 -1.3 5,280,145 - QEN71_RS23675 0.86 +0.7 5,280,145 - QEN71_RS23675 0.86 +0.2 5,280,145 - QEN71_RS23675 0.86 +0.3 5,280,145 - QEN71_RS23675 0.86 +0.7 5,280,145 - QEN71_RS23675 0.86 -0.4 5,280,145 - QEN71_RS23675 0.86 -1.9 5,280,145 - QEN71_RS23675 0.86 -0.3 5,280,145 - QEN71_RS23675 0.86 +0.9 5,280,146 + QEN71_RS23675 0.86 -0.2 5,280,147 - QEN71_RS23675 0.87 +0.7 5,280,238 + +0.0 5,280,238 + -1.4 5,280,238 + +1.0 5,280,238 + +0.3 5,280,239 - +0.7 5,280,293 + +1.0 5,280,293 + -0.2 5,280,293 + +0.3 5,280,293 + +1.7 5,280,293 + +0.6 5,280,294 - +0.2 5,280,294 - +0.4 5,280,294 - +0.1 5,280,294 - +1.2 5,280,294 - +0.9 5,280,294 - +0.2 5,280,335 - +0.9 5,280,379 + +1.0 5,280,429 + +0.8 5,280,429 + +0.5 5,280,429 + -0.3 5,280,429 + -0.1 5,280,429 + -0.9 5,280,429 + +0.5 5,280,429 + +0.7 5,280,429 + -1.2 5,280,429 + -1.1 5,280,430 - +0.7 5,280,430 - -0.1 5,280,430 - +1.1 5,280,489 + QEN71_RS23680 0.18 -1.0 5,280,490 - QEN71_RS23680 0.18 +0.6 5,280,490 - QEN71_RS23680 0.18 +0.0 5,280,490 - QEN71_RS23680 0.18 +0.0 5,280,490 - QEN71_RS23680 0.18 -0.0 5,280,627 + QEN71_RS23680 0.39 -0.3 5,280,627 + QEN71_RS23680 0.39 -0.1 5,280,628 - QEN71_RS23680 0.39 +1.0 5,280,628 - QEN71_RS23680 0.39 +0.8 5,280,696 + QEN71_RS23680 0.49 -0.2 5,280,696 + QEN71_RS23680 0.49 +0.0 5,280,696 + QEN71_RS23680 0.49 +0.5 5,280,867 + QEN71_RS23680 0.74 +0.9 5,280,867 + QEN71_RS23680 0.74 -0.2 5,280,868 - QEN71_RS23680 0.74 -0.2
Or see this region's nucleotide sequence