Strain Fitness in Paraburkholderia sabiae LMG 24235 around QEN71_RS14915

Experiment: D-Xylose (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Xylose (C)
3,324,369	+		QEN71_RS14905	0.53	+3.2
3,324,369	+		QEN71_RS14905	0.53	+1.1
3,324,369	+		QEN71_RS14905	0.53	-1.9
3,324,369	+		QEN71_RS14905	0.53	-0.5
3,324,369	+		QEN71_RS14905	0.53	-0.4
3,324,369	+		QEN71_RS14905	0.53	-0.8
3,324,369	+		QEN71_RS14905	0.53	-1.4
3,324,369	+		QEN71_RS14905	0.53	-0.3
3,324,370	-		QEN71_RS14905	0.54	-0.3
3,324,370	-		QEN71_RS14905	0.54	+0.5
3,324,370	-		QEN71_RS14905	0.54	-0.1
3,324,370	-		QEN71_RS14905	0.54	-1.0
3,324,370	-		QEN71_RS14905	0.54	+0.0
3,324,370	-		QEN71_RS14905	0.54	-0.7
3,324,370	-		QEN71_RS14905	0.54	-1.6
3,324,370	-		QEN71_RS14905	0.54	-0.6
3,324,370	-		QEN71_RS14905	0.54	-0.1
3,324,373	+		QEN71_RS14905	0.54	-0.3
3,324,373	+		QEN71_RS14905	0.54	-1.1
3,324,373	+		QEN71_RS14905	0.54	-1.7
3,324,373	+		QEN71_RS14905	0.54	+0.7
3,324,373	+		QEN71_RS14905	0.54	+0.3
3,324,373	+		QEN71_RS14905	0.54	-0.1
3,324,373	+		QEN71_RS14905	0.54	-2.9
3,324,373	+		QEN71_RS14905	0.54	+0.8
3,324,374	-		QEN71_RS14905	0.54	+1.3
3,324,374	-		QEN71_RS14905	0.54	-0.1
3,324,374	-		QEN71_RS14905	0.54	+0.2
3,324,374	-		QEN71_RS14905	0.54	-1.1
3,324,374	-		QEN71_RS14905	0.54	-0.6
3,324,374	-		QEN71_RS14905	0.54	-0.0
3,324,374	-		QEN71_RS14905	0.54	-1.5
3,324,374	-		QEN71_RS14905	0.54	+0.0
3,324,466	+		QEN71_RS14905	0.62	-1.7
3,324,466	+		QEN71_RS14905	0.62	+0.7
3,324,466	+		QEN71_RS14905	0.62	-0.0
3,324,466	+		QEN71_RS14905	0.62	-0.3
3,324,466	+		QEN71_RS14905	0.62	-0.8
3,324,466	+		QEN71_RS14905	0.62	-2.2
3,324,466	+		QEN71_RS14905	0.62	-0.7
3,324,467	-		QEN71_RS14905	0.62	-0.7
3,324,467	-		QEN71_RS14905	0.62	+0.2
3,324,467	-		QEN71_RS14905	0.62	-0.5
3,324,484	+		QEN71_RS14905	0.64	-0.4
3,324,508	+		QEN71_RS14905	0.66	-0.0
3,324,508	+		QEN71_RS14905	0.66	-0.0
3,324,508	+		QEN71_RS14905	0.66	+0.1
3,324,508	+		QEN71_RS14905	0.66	+0.1
3,324,509	-		QEN71_RS14905	0.66	+1.1
3,324,509	-		QEN71_RS14905	0.66	-0.8
3,324,509	-		QEN71_RS14905	0.66	-0.7
3,324,509	-		QEN71_RS14905	0.66	-2.6
3,324,518	-		QEN71_RS14905	0.67	-0.4
3,324,682	+		QEN71_RS14905	0.81	-0.8
3,324,683	-		QEN71_RS14905	0.81	-1.3
3,324,685	+		QEN71_RS14905	0.81	-0.3
3,324,686	-		QEN71_RS14905	0.81	+1.3
3,324,743	-		QEN71_RS14905	0.86	+0.5
3,324,766	+		QEN71_RS14905	0.88	-0.0
3,324,793	+				-0.9
3,324,793	+				-0.6
3,324,793	+				+0.2
3,324,794	-				-0.6
3,324,794	-				-0.1
3,324,794	-				+1.3
3,324,794	-				-0.2
3,324,794	-				+0.2
3,324,975	+				-1.6
3,324,976	-				-1.1
3,324,988	+				+0.8
3,324,989	-				+0.1
3,324,989	-				+0.5
3,324,997	+				-1.1
3,324,997	+				-0.4
3,324,998	-				-0.0
3,324,998	-				+0.1
3,324,998	-				+1.3
3,324,998	-				-0.1
3,324,999	+				-0.9
3,324,999	+				+0.5
3,324,999	+				-0.3
3,324,999	+				-2.3
3,324,999	+				+1.0
3,325,000	-				-0.0
3,325,000	-				-0.6
3,325,000	-				-1.4
3,325,000	-				+0.7
3,325,000	-				+1.3
3,325,000	-				+0.2
3,325,000	-				+0.3
3,325,015	-				-1.1
3,325,044	-				+0.7
3,325,044	-				+1.3
3,325,044	-				+0.7
3,325,104	+		QEN71_RS14910	0.40	-0.2
3,325,104	+		QEN71_RS14910	0.40	+0.8
3,325,105	-		QEN71_RS14910	0.41	-1.2
3,325,105	-		QEN71_RS14910	0.41	-1.4
3,325,183	-				-0.7
3,325,274	+				+0.5
3,325,275	-				+0.1
3,325,275	-				-0.7
3,325,446	+				+0.7
3,325,446	+				+0.1
3,325,447	-				+0.7
3,325,447	-				+1.4
3,325,608	+		QEN71_RS14915	0.24	+0.1
3,325,620	+		QEN71_RS14915	0.26	+0.3
3,325,620	+		QEN71_RS14915	0.26	+0.6
3,325,620	+		QEN71_RS14915	0.26	-0.5
3,325,620	+		QEN71_RS14915	0.26	+0.3
3,325,621	-		QEN71_RS14915	0.26	-0.8
3,325,621	-		QEN71_RS14915	0.26	+0.2
3,325,621	-		QEN71_RS14915	0.26	+0.6
3,325,698	+		QEN71_RS14915	0.33	-0.1
3,325,698	+		QEN71_RS14915	0.33	+0.2
3,325,698	+		QEN71_RS14915	0.33	-0.3
3,325,698	+		QEN71_RS14915	0.33	+0.2
3,325,699	-		QEN71_RS14915	0.33	-0.9
3,325,699	-		QEN71_RS14915	0.33	-0.7
3,325,734	+		QEN71_RS14915	0.37	-0.8
3,325,735	-		QEN71_RS14915	0.37	-0.2
3,325,776	+		QEN71_RS14915	0.41	+0.5
3,325,776	+		QEN71_RS14915	0.41	-0.0
3,325,776	+		QEN71_RS14915	0.41	+1.6
3,325,776	+		QEN71_RS14915	0.41	+0.1
3,325,776	+		QEN71_RS14915	0.41	+0.0
3,325,776	+		QEN71_RS14915	0.41	-1.4
3,325,777	-		QEN71_RS14915	0.41	-0.4
3,325,777	-		QEN71_RS14915	0.41	-0.1
3,325,777	-		QEN71_RS14915	0.41	+0.6
3,325,777	-		QEN71_RS14915	0.41	+0.5
3,325,777	-		QEN71_RS14915	0.41	-0.2
3,325,777	-		QEN71_RS14915	0.41	+0.7
3,325,777	-		QEN71_RS14915	0.41	-1.2
3,325,977	+		QEN71_RS14915	0.60	+0.8
3,325,977	+		QEN71_RS14915	0.60	+0.2
3,325,977	+		QEN71_RS14915	0.60	+2.3
3,325,978	-		QEN71_RS14915	0.60	-0.3
3,326,065	-		QEN71_RS14915	0.69	-1.4
3,326,065	-		QEN71_RS14915	0.69	-1.4
3,326,184	+		QEN71_RS14915	0.80	+1.7
3,326,185	-		QEN71_RS14915	0.80	+0.3
3,326,199	+		QEN71_RS14915	0.81	-0.9
3,326,199	+		QEN71_RS14915	0.81	+0.3
3,326,199	+		QEN71_RS14915	0.81	+0.6
3,326,199	+		QEN71_RS14915	0.81	-1.7
3,326,200	-		QEN71_RS14915	0.82	-1.4
3,326,200	-		QEN71_RS14915	0.82	-0.6
3,326,200	-		QEN71_RS14915	0.82	+0.1
3,326,200	-		QEN71_RS14915	0.82	-0.1
3,326,200	-		QEN71_RS14915	0.82	+0.0
3,326,301	+				-0.4
3,326,301	+				-0.2
3,326,417	+				+0.9
3,326,417	+				-0.3
3,326,417	+				+0.2
3,326,418	-				-0.3
3,326,418	-				+0.6
3,326,534	-		QEN71_RS14920	0.32	+0.6
3,326,554	+		QEN71_RS14920	0.38	+0.3
3,326,554	+		QEN71_RS14920	0.38	-0.3
3,326,554	+		QEN71_RS14920	0.38	-0.1
3,326,554	+		QEN71_RS14920	0.38	-0.7
3,326,554	+		QEN71_RS14920	0.38	+0.4
3,326,554	+		QEN71_RS14920	0.38	-0.3
3,326,554	+		QEN71_RS14920	0.38	+0.5
3,326,554	+		QEN71_RS14920	0.38	+0.3
3,326,555	-		QEN71_RS14920	0.38	+0.8
3,326,555	-		QEN71_RS14920	0.38	-1.6
3,326,555	-		QEN71_RS14920	0.38	-0.1
3,326,555	-		QEN71_RS14920	0.38	+0.1
3,326,574	+		QEN71_RS14920	0.44	-2.0
3,326,574	+		QEN71_RS14920	0.44	+1.6
3,326,574	+		QEN71_RS14920	0.44	+0.4
3,326,575	-		QEN71_RS14920	0.44	+0.8
3,326,575	-		QEN71_RS14920	0.44	-1.4
3,326,575	-		QEN71_RS14920	0.44	-0.5
3,326,575	-		QEN71_RS14920	0.44	+0.6
3,326,707	+		QEN71_RS14920	0.82	+0.7
3,326,707	+		QEN71_RS14920	0.82	-0.4
3,326,892	+		QEN71_RS14925	0.10	-0.5
3,326,892	+		QEN71_RS14925	0.10	+0.1
3,326,893	-		QEN71_RS14925	0.10	+0.2
3,326,893	-		QEN71_RS14925	0.10	-1.2
3,326,893	-		QEN71_RS14925	0.10	+0.2
3,326,958	+		QEN71_RS14925	0.15	-0.9
3,326,973	+		QEN71_RS14925	0.17	-0.4
3,326,974	-		QEN71_RS14925	0.17	-0.8
3,326,974	-		QEN71_RS14925	0.17	+2.4
3,326,987	+		QEN71_RS14925	0.18	+0.3
3,327,342	+		QEN71_RS14925	0.46	-1.6
3,327,342	+		QEN71_RS14925	0.46	+1.3
3,327,343	-		QEN71_RS14925	0.46	-0.8
3,327,343	-		QEN71_RS14925	0.46	-0.3