Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS04730 and QEN71_RS04735 are separated by 79 nucleotides QEN71_RS04735 and QEN71_RS04740 are separated by 160 nucleotides QEN71_RS04740 and QEN71_RS04745 are separated by 48 nucleotides QEN71_RS04745 and QEN71_RS04750 are separated by 73 nucleotides QEN71_RS04750 and QEN71_RS04755 overlap by 4 nucleotides
QEN71_RS04730: QEN71_RS04730 - hypothetical protein, at 1,033,599 to 1,034,447
_RS04730
QEN71_RS04735: QEN71_RS04735 - DUF2214 family protein, at 1,034,527 to 1,034,985
_RS04735
QEN71_RS04740: QEN71_RS04740 - tRNA-Val, at 1,035,146 to 1,035,220
_RS04740
QEN71_RS04745: QEN71_RS04745 - DNA polymerase III subunit epsilon, at 1,035,269 to 1,036,018
_RS04745
QEN71_RS04750: QEN71_RS04750 - ribonuclease HI, at 1,036,092 to 1,036,538
_RS04750
QEN71_RS04755: QEN71_RS04755 - class I SAM-dependent methyltransferase, at 1,036,535 to 1,037,350
_RS04755
Position (kb)
1035
1036
1037 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1034.357 kb on + strand, within QEN71_RS04730 at 1034.743 kb on + strand, within QEN71_RS04735 at 1034.743 kb on + strand, within QEN71_RS04735 at 1034.743 kb on + strand, within QEN71_RS04735 at 1034.743 kb on + strand, within QEN71_RS04735 at 1034.744 kb on - strand, within QEN71_RS04735 at 1034.744 kb on - strand, within QEN71_RS04735 at 1034.744 kb on - strand, within QEN71_RS04735 at 1034.744 kb on - strand, within QEN71_RS04735 at 1034.744 kb on - strand, within QEN71_RS04735 at 1034.744 kb on - strand, within QEN71_RS04735 at 1034.746 kb on + strand, within QEN71_RS04735 at 1034.746 kb on + strand, within QEN71_RS04735 at 1034.746 kb on + strand, within QEN71_RS04735 at 1034.746 kb on + strand, within QEN71_RS04735 at 1034.746 kb on + strand, within QEN71_RS04735 at 1034.747 kb on - strand, within QEN71_RS04735 at 1034.747 kb on - strand, within QEN71_RS04735 at 1034.747 kb on - strand, within QEN71_RS04735 at 1034.747 kb on - strand, within QEN71_RS04735 at 1034.747 kb on - strand, within QEN71_RS04735 at 1034.747 kb on - strand, within QEN71_RS04735 at 1034.747 kb on - strand, within QEN71_RS04735 at 1034.747 kb on - strand, within QEN71_RS04735 at 1034.871 kb on + strand, within QEN71_RS04735 at 1034.886 kb on + strand, within QEN71_RS04735 at 1034.886 kb on + strand, within QEN71_RS04735 at 1034.886 kb on + strand, within QEN71_RS04735 at 1034.886 kb on + strand, within QEN71_RS04735 at 1034.886 kb on + strand, within QEN71_RS04735 at 1034.886 kb on + strand, within QEN71_RS04735 at 1034.887 kb on - strand, within QEN71_RS04735 at 1035.016 kb on + strand at 1035.016 kb on + strand at 1035.016 kb on + strand at 1035.016 kb on + strand at 1035.016 kb on + strand at 1035.017 kb on - strand at 1035.017 kb on - strand at 1035.017 kb on - strand at 1035.017 kb on - strand at 1035.017 kb on - strand at 1035.017 kb on - strand at 1035.017 kb on - strand at 1035.017 kb on - strand at 1035.017 kb on - strand at 1035.017 kb on - strand at 1035.017 kb on - strand at 1035.017 kb on - strand at 1035.074 kb on + strand at 1035.074 kb on + strand at 1035.075 kb on - strand at 1035.263 kb on + strand at 1035.271 kb on - strand at 1035.271 kb on - strand at 1036.113 kb on + strand at 1036.113 kb on + strand at 1036.114 kb on - strand at 1036.114 kb on - strand at 1036.114 kb on - strand at 1036.114 kb on - strand at 1036.114 kb on - strand at 1036.114 kb on - strand at 1036.556 kb on - strand at 1036.556 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 1,034,357 + QEN71_RS04730 0.89 -1.9 1,034,743 + QEN71_RS04735 0.47 -1.1 1,034,743 + QEN71_RS04735 0.47 +0.1 1,034,743 + QEN71_RS04735 0.47 -0.2 1,034,743 + QEN71_RS04735 0.47 -1.1 1,034,744 - QEN71_RS04735 0.47 -0.0 1,034,744 - QEN71_RS04735 0.47 +0.6 1,034,744 - QEN71_RS04735 0.47 -0.1 1,034,744 - QEN71_RS04735 0.47 -2.1 1,034,744 - QEN71_RS04735 0.47 -0.2 1,034,744 - QEN71_RS04735 0.47 +0.3 1,034,746 + QEN71_RS04735 0.48 -0.0 1,034,746 + QEN71_RS04735 0.48 +0.1 1,034,746 + QEN71_RS04735 0.48 -0.7 1,034,746 + QEN71_RS04735 0.48 +1.3 1,034,746 + QEN71_RS04735 0.48 -0.4 1,034,747 - QEN71_RS04735 0.48 -2.2 1,034,747 - QEN71_RS04735 0.48 +0.5 1,034,747 - QEN71_RS04735 0.48 -0.7 1,034,747 - QEN71_RS04735 0.48 +0.4 1,034,747 - QEN71_RS04735 0.48 -1.1 1,034,747 - QEN71_RS04735 0.48 -0.4 1,034,747 - QEN71_RS04735 0.48 -3.1 1,034,747 - QEN71_RS04735 0.48 +0.5 1,034,871 + QEN71_RS04735 0.75 -0.1 1,034,886 + QEN71_RS04735 0.78 -0.1 1,034,886 + QEN71_RS04735 0.78 -0.7 1,034,886 + QEN71_RS04735 0.78 +0.2 1,034,886 + QEN71_RS04735 0.78 -0.8 1,034,886 + QEN71_RS04735 0.78 -0.4 1,034,886 + QEN71_RS04735 0.78 -1.0 1,034,887 - QEN71_RS04735 0.78 +0.3 1,035,016 + -0.5 1,035,016 + -0.4 1,035,016 + -0.4 1,035,016 + -1.0 1,035,016 + +0.4 1,035,017 - +0.2 1,035,017 - -0.8 1,035,017 - +1.3 1,035,017 - +0.7 1,035,017 - -0.3 1,035,017 - -0.0 1,035,017 - +0.2 1,035,017 - +1.7 1,035,017 - -0.1 1,035,017 - -2.5 1,035,017 - -0.8 1,035,017 - -0.0 1,035,074 + -0.3 1,035,074 + -0.9 1,035,075 - -2.0 1,035,263 + -0.2 1,035,271 - -1.6 1,035,271 - -0.5 1,036,113 + -0.8 1,036,113 + +0.0 1,036,114 - +0.2 1,036,114 - -0.1 1,036,114 - +0.2 1,036,114 - +0.5 1,036,114 - -1.4 1,036,114 - -0.8 1,036,556 - -0.8 1,036,556 - +0.7
Or see this region's nucleotide sequence