Experiment: D-Xylose (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt QEN71_RS04300 and QEN71_RS04305 are separated by 29 nucleotides QEN71_RS04305 and QEN71_RS04310 overlap by 4 nucleotides QEN71_RS04310 and QEN71_RS04315 are separated by 83 nucleotides
QEN71_RS04300: QEN71_RS04300 - hypothetical protein, at 947,314 to 948,711
_RS04300
QEN71_RS04305: QEN71_RS04305 - hypothetical protein, at 948,741 to 949,352
_RS04305
QEN71_RS04310: QEN71_RS04310 - hypothetical protein, at 949,349 to 949,861
_RS04310
QEN71_RS04315: QEN71_RS04315 - hypothetical protein, at 949,945 to 950,427
_RS04315
Position (kb) 949
950 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 948.356 kb on + strand, within QEN71_RS04300 at 948.357 kb on - strand, within QEN71_RS04300 at 948.372 kb on - strand, within QEN71_RS04300 at 948.437 kb on + strand, within QEN71_RS04300 at 948.437 kb on + strand, within QEN71_RS04300 at 948.437 kb on + strand, within QEN71_RS04300 at 948.437 kb on + strand, within QEN71_RS04300 at 948.437 kb on + strand, within QEN71_RS04300 at 948.437 kb on + strand, within QEN71_RS04300 at 948.437 kb on + strand, within QEN71_RS04300 at 948.437 kb on + strand, within QEN71_RS04300 at 948.438 kb on - strand, within QEN71_RS04300 at 948.438 kb on - strand, within QEN71_RS04300 at 948.438 kb on - strand, within QEN71_RS04300 at 948.438 kb on - strand, within QEN71_RS04300 at 948.438 kb on - strand, within QEN71_RS04300 at 948.438 kb on - strand, within QEN71_RS04300 at 948.476 kb on + strand, within QEN71_RS04300 at 948.476 kb on + strand, within QEN71_RS04300 at 948.476 kb on + strand, within QEN71_RS04300 at 948.476 kb on + strand, within QEN71_RS04300 at 948.476 kb on + strand, within QEN71_RS04300 at 948.477 kb on - strand, within QEN71_RS04300 at 948.477 kb on - strand, within QEN71_RS04300 at 948.477 kb on - strand, within QEN71_RS04300 at 948.477 kb on - strand, within QEN71_RS04300 at 948.477 kb on - strand, within QEN71_RS04300 at 948.477 kb on - strand, within QEN71_RS04300 at 948.477 kb on - strand, within QEN71_RS04300 at 948.477 kb on - strand, within QEN71_RS04300 at 948.512 kb on + strand, within QEN71_RS04300 at 948.696 kb on + strand at 948.696 kb on + strand at 948.696 kb on + strand at 948.696 kb on + strand at 948.697 kb on - strand at 948.697 kb on - strand at 948.725 kb on + strand at 948.728 kb on + strand at 948.728 kb on + strand at 948.728 kb on + strand at 948.728 kb on + strand at 948.728 kb on + strand at 948.728 kb on + strand at 948.728 kb on + strand at 948.728 kb on + strand at 948.728 kb on + strand at 948.728 kb on + strand at 948.729 kb on - strand at 948.729 kb on - strand at 948.729 kb on - strand at 948.729 kb on - strand at 948.729 kb on - strand at 948.729 kb on - strand at 948.729 kb on - strand at 948.729 kb on - strand at 948.729 kb on - strand at 948.729 kb on - strand at 948.729 kb on - strand at 948.729 kb on - strand at 948.742 kb on + strand at 948.794 kb on + strand at 948.795 kb on - strand at 948.930 kb on + strand, within QEN71_RS04305 at 948.931 kb on - strand, within QEN71_RS04305 at 949.006 kb on - strand, within QEN71_RS04305 at 949.273 kb on - strand, within QEN71_RS04305 at 949.867 kb on + strand at 949.946 kb on + strand at 949.947 kb on - strand at 949.958 kb on + strand at 949.959 kb on - strand at 949.999 kb on - strand, within QEN71_RS04315 at 949.999 kb on - strand, within QEN71_RS04315 at 949.999 kb on - strand, within QEN71_RS04315 at 950.002 kb on + strand, within QEN71_RS04315 at 950.002 kb on + strand, within QEN71_RS04315 at 950.002 kb on + strand, within QEN71_RS04315 at 950.003 kb on - strand, within QEN71_RS04315 at 950.003 kb on - strand, within QEN71_RS04315 at 950.003 kb on - strand, within QEN71_RS04315 at 950.215 kb on - strand, within QEN71_RS04315 at 950.600 kb on - strand at 950.600 kb on - strand at 950.600 kb on - strand at 950.600 kb on - strand at 950.616 kb on + strand at 950.616 kb on + strand at 950.616 kb on + strand at 950.616 kb on + strand at 950.616 kb on + strand at 950.616 kb on + strand at 950.616 kb on + strand at 950.616 kb on + strand at 950.617 kb on - strand at 950.617 kb on - strand at 950.617 kb on - strand at 950.617 kb on - strand at 950.617 kb on - strand at 950.617 kb on - strand at 950.617 kb on - strand at 950.617 kb on - strand at 950.619 kb on + strand at 950.619 kb on + strand at 950.619 kb on + strand at 950.619 kb on + strand at 950.620 kb on - strand at 950.627 kb on + strand at 950.656 kb on + strand at 950.656 kb on + strand at 950.656 kb on + strand at 950.657 kb on - strand at 950.657 kb on - strand at 950.659 kb on + strand at 950.659 kb on + strand at 950.659 kb on + strand at 950.659 kb on + strand at 950.659 kb on + strand at 950.660 kb on - strand at 950.660 kb on - strand at 950.660 kb on - strand at 950.660 kb on - strand at 950.723 kb on + strand at 950.724 kb on - strand at 950.756 kb on + strand at 950.757 kb on - strand at 950.757 kb on - strand at 950.758 kb on + strand at 950.758 kb on + strand at 950.758 kb on + strand at 950.758 kb on + strand at 950.758 kb on + strand at 950.759 kb on - strand at 950.759 kb on - strand at 950.759 kb on - strand at 950.759 kb on - strand at 950.759 kb on - strand at 950.761 kb on + strand at 950.761 kb on + strand at 950.761 kb on + strand at 950.761 kb on + strand at 950.761 kb on + strand at 950.761 kb on + strand at 950.761 kb on + strand at 950.761 kb on + strand at 950.762 kb on - strand at 950.762 kb on - strand at 950.762 kb on - strand at 950.762 kb on - strand at 950.762 kb on - strand at 950.762 kb on - strand at 950.762 kb on - strand at 950.762 kb on - strand at 950.762 kb on - strand at 950.762 kb on - strand at 950.762 kb on - strand at 950.762 kb on - strand at 950.799 kb on + strand at 950.815 kb on + strand at 950.816 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Xylose (C) remove 948,356 + QEN71_RS04300 0.75 +0.9 948,357 - QEN71_RS04300 0.75 +1.4 948,372 - QEN71_RS04300 0.76 +0.1 948,437 + QEN71_RS04300 0.80 +0.9 948,437 + QEN71_RS04300 0.80 +1.1 948,437 + QEN71_RS04300 0.80 -0.7 948,437 + QEN71_RS04300 0.80 -0.6 948,437 + QEN71_RS04300 0.80 -0.1 948,437 + QEN71_RS04300 0.80 +0.1 948,437 + QEN71_RS04300 0.80 +0.6 948,437 + QEN71_RS04300 0.80 -1.4 948,438 - QEN71_RS04300 0.80 -0.2 948,438 - QEN71_RS04300 0.80 +0.2 948,438 - QEN71_RS04300 0.80 +0.6 948,438 - QEN71_RS04300 0.80 -1.0 948,438 - QEN71_RS04300 0.80 -0.6 948,438 - QEN71_RS04300 0.80 -0.5 948,476 + QEN71_RS04300 0.83 +0.1 948,476 + QEN71_RS04300 0.83 +0.3 948,476 + QEN71_RS04300 0.83 +1.1 948,476 + QEN71_RS04300 0.83 -0.7 948,476 + QEN71_RS04300 0.83 +1.6 948,477 - QEN71_RS04300 0.83 -0.2 948,477 - QEN71_RS04300 0.83 -1.4 948,477 - QEN71_RS04300 0.83 -0.1 948,477 - QEN71_RS04300 0.83 +0.6 948,477 - QEN71_RS04300 0.83 +0.1 948,477 - QEN71_RS04300 0.83 -0.9 948,477 - QEN71_RS04300 0.83 +0.7 948,477 - QEN71_RS04300 0.83 -0.1 948,512 + QEN71_RS04300 0.86 +0.8 948,696 + -1.6 948,696 + +0.1 948,696 + -0.6 948,696 + -0.4 948,697 - -2.5 948,697 - +0.3 948,725 + -1.1 948,728 + -1.0 948,728 + -1.1 948,728 + -0.3 948,728 + -0.4 948,728 + +0.9 948,728 + +0.5 948,728 + -0.9 948,728 + -0.7 948,728 + -0.1 948,728 + -0.5 948,729 - -0.9 948,729 - -1.3 948,729 - -1.8 948,729 - -0.8 948,729 - -0.3 948,729 - -0.6 948,729 - -0.8 948,729 - +0.7 948,729 - +0.0 948,729 - -1.1 948,729 - -1.4 948,729 - +0.4 948,742 + +0.1 948,794 + +0.9 948,795 - -1.1 948,930 + QEN71_RS04305 0.31 +0.1 948,931 - QEN71_RS04305 0.31 +1.1 949,006 - QEN71_RS04305 0.43 +0.3 949,273 - QEN71_RS04305 0.87 +0.1 949,867 + -0.7 949,946 + -0.4 949,947 - +0.8 949,958 + -1.8 949,959 - -0.1 949,999 - QEN71_RS04315 0.11 +1.1 949,999 - QEN71_RS04315 0.11 -0.4 949,999 - QEN71_RS04315 0.11 +0.4 950,002 + QEN71_RS04315 0.12 -0.4 950,002 + QEN71_RS04315 0.12 -1.1 950,002 + QEN71_RS04315 0.12 +0.1 950,003 - QEN71_RS04315 0.12 +0.9 950,003 - QEN71_RS04315 0.12 +0.2 950,003 - QEN71_RS04315 0.12 -0.8 950,215 - QEN71_RS04315 0.56 +0.0 950,600 - -0.4 950,600 - -3.1 950,600 - -0.6 950,600 - +0.1 950,616 + -0.7 950,616 + +0.6 950,616 + -0.9 950,616 + -0.9 950,616 + +0.3 950,616 + -0.3 950,616 + -0.5 950,616 + -0.0 950,617 - +0.0 950,617 - +1.1 950,617 - -0.7 950,617 - +0.1 950,617 - -1.4 950,617 - +0.3 950,617 - +0.9 950,617 - +0.5 950,619 + +0.2 950,619 + -1.2 950,619 + -1.0 950,619 + +0.0 950,620 - -0.1 950,627 + -1.9 950,656 + -2.6 950,656 + -0.3 950,656 + +0.1 950,657 - +0.1 950,657 - +0.6 950,659 + -0.1 950,659 + -0.3 950,659 + -0.4 950,659 + -0.9 950,659 + -1.1 950,660 - +0.6 950,660 - +0.7 950,660 - +0.9 950,660 - -0.3 950,723 + +0.1 950,724 - +0.3 950,756 + -1.1 950,757 - +0.3 950,757 - +0.1 950,758 + -0.7 950,758 + +1.0 950,758 + -1.0 950,758 + -0.4 950,758 + +1.1 950,759 - -1.9 950,759 - +0.4 950,759 - +0.5 950,759 - +0.2 950,759 - +0.6 950,761 + -0.3 950,761 + -0.6 950,761 + -1.3 950,761 + +0.1 950,761 + -1.1 950,761 + -0.3 950,761 + -0.3 950,761 + +1.8 950,762 - -1.3 950,762 - +1.4 950,762 - -0.9 950,762 - -0.1 950,762 - +0.5 950,762 - +0.1 950,762 - +1.5 950,762 - -0.9 950,762 - -0.1 950,762 - +0.7 950,762 - +0.1 950,762 - -0.6 950,799 + -0.1 950,815 + +0.7 950,816 - +0.9
Or see this region's nucleotide sequence