Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_04002

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
4,489,308	+		MIT1002_04001	0.58	-0.8
4,489,308	+		MIT1002_04001	0.58	+0.4
4,489,310	-		MIT1002_04001	0.58	+0.5
4,489,331	-		MIT1002_04001	0.59	-0.0
4,489,360	-		MIT1002_04001	0.61	-0.9
4,489,425	-		MIT1002_04001	0.64	-1.7
4,489,449	+		MIT1002_04001	0.65	+3.0
4,489,465	+		MIT1002_04001	0.66	-0.1
4,489,465	+		MIT1002_04001	0.66	-1.0
4,489,465	+		MIT1002_04001	0.66	-0.3
4,489,473	-		MIT1002_04001	0.67	+0.1
4,489,473	-		MIT1002_04001	0.67	-1.1
4,489,486	+		MIT1002_04001	0.67	+1.2
4,489,514	-		MIT1002_04001	0.69	-0.1
4,489,521	+		MIT1002_04001	0.69	-0.1
4,489,523	+		MIT1002_04001	0.69	+1.2
4,489,544	+		MIT1002_04001	0.70	+1.0
4,489,600	-		MIT1002_04001	0.73	+0.7
4,489,618	+		MIT1002_04001	0.74	+0.0
4,489,626	+		MIT1002_04001	0.74	-3.1
4,489,634	-		MIT1002_04001	0.75	-1.4
4,489,634	-		MIT1002_04001	0.75	-2.4
4,489,656	-		MIT1002_04001	0.76	-2.0
4,489,723	-		MIT1002_04001	0.79	+0.8
4,489,798	+		MIT1002_04001	0.83	-0.3
4,489,806	-		MIT1002_04001	0.84	-3.1
4,489,874	-		MIT1002_04001	0.87	-2.0
4,489,880	+		MIT1002_04001	0.87	-0.2
4,489,880	+		MIT1002_04001	0.87	-1.8
4,489,881	-		MIT1002_04001	0.87	-0.7
4,489,888	-		MIT1002_04001	0.88	-0.0
4,489,892	-		MIT1002_04001	0.88	-0.3
4,489,905	+		MIT1002_04001	0.89	+2.0
4,489,980	+				-0.2
4,489,980	+				+0.1
4,489,980	+				+1.0
4,489,988	-				-0.1
4,489,988	-				+0.3
4,489,988	-				+1.5
4,489,988	-				-0.7
4,489,988	-				+1.3
4,489,988	-				-2.2
4,490,005	+				+0.2
4,490,030	-				-0.5
4,490,037	+				+0.4
4,490,045	-				+0.0
4,490,116	+				-0.1
4,490,116	+				-0.1
4,490,185	-				+0.7
4,490,187	+				+1.5
4,490,235	+				+0.7
4,490,236	-				-3.2
4,490,243	-				+1.0
4,490,243	-				-1.5
4,490,243	-				-2.3
4,490,286	-		MIT1002_04002	0.20	+0.1
4,490,351	-		MIT1002_04002	0.52	-1.9
4,490,376	+		MIT1002_04002	0.64	-0.2
4,490,463	-				+0.6
4,490,481	+				+1.9
4,490,489	-				-4.0
4,490,489	-				-2.0
4,490,491	+				+0.1
4,490,491	+				-4.6
4,490,491	+				+0.9
4,490,491	+				+1.0
4,490,491	+				+1.1
4,490,499	-				-1.9
4,490,499	-				+0.9
4,490,499	-				-1.1
4,490,499	-				-1.9
4,490,507	-				-0.4
4,490,556	+				+0.1
4,490,599	-				-0.2
4,490,714	-				+1.1
4,490,727	+				+2.3
4,490,727	-				+1.0
4,490,727	-				+1.2
4,490,735	-				+1.0
4,490,810	+		MIT1002_04003	0.16	-0.9
4,490,851	-		MIT1002_04003	0.20	-1.0
4,490,862	+		MIT1002_04003	0.21	-3.3
4,490,862	+		MIT1002_04003	0.21	-2.5
4,490,870	-		MIT1002_04003	0.22	-1.5
4,490,870	-		MIT1002_04003	0.22	+1.5
4,490,870	-		MIT1002_04003	0.22	+0.7
4,490,870	-		MIT1002_04003	0.22	-1.5
4,490,870	-		MIT1002_04003	0.22	-0.3
4,490,870	-		MIT1002_04003	0.22	-0.3
4,490,870	-		MIT1002_04003	0.22	+0.6
4,490,870	-		MIT1002_04003	0.22	+0.2
4,490,870	-		MIT1002_04003	0.22	-2.6
4,490,967	+		MIT1002_04003	0.30	+2.2
4,490,972	+		MIT1002_04003	0.31	-2.5
4,490,989	-		MIT1002_04003	0.32	-0.4
4,490,989	-		MIT1002_04003	0.32	+2.7
4,491,009	-		MIT1002_04003	0.34	-2.8
4,491,084	+		MIT1002_04003	0.41	+3.2
4,491,092	-		MIT1002_04003	0.42	+0.6
4,491,106	+		MIT1002_04003	0.43	-2.8
4,491,192	+		MIT1002_04003	0.51	+2.7
4,491,207	-		MIT1002_04003	0.52	+0.1
4,491,222	+		MIT1002_04003	0.53	-0.4
4,491,244	+		MIT1002_04003	0.55	-2.6
4,491,335	+		MIT1002_04003	0.63	+0.2
4,491,394	+		MIT1002_04003	0.69	+0.5
4,491,406	+		MIT1002_04003	0.70	-3.3
4,491,445	-		MIT1002_04003	0.73	-1.2