Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03998

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
4,485,515	-				+0.7
4,485,549	+				-0.0
4,485,575	+				+1.7
4,485,580	+				+0.9
4,485,589	+				+0.8
4,485,589	+				-0.2
4,485,636	+				+0.8
4,485,636	+				-0.9
4,485,636	+				-2.3
4,485,644	-				-0.4
4,485,644	-				+0.1
4,485,713	-				+1.0
4,485,763	-				-2.5
4,485,891	-		MIT1002_03997	0.28	+1.6
4,485,938	+		MIT1002_03997	0.37	-1.5
4,485,977	+		MIT1002_03997	0.44	-0.9
4,486,078	-		MIT1002_03997	0.62	-0.3
4,486,080	+		MIT1002_03997	0.62	+1.3
4,486,088	-		MIT1002_03997	0.64	-0.9
4,486,164	-		MIT1002_03997	0.77	-0.7
4,486,204	-		MIT1002_03997	0.85	+0.4
4,486,211	+		MIT1002_03997	0.86	+1.1
4,486,211	+		MIT1002_03997	0.86	-0.3
4,486,240	-				-0.0
4,486,300	+				+0.3
4,486,408	+		MIT1002_03998	0.27	-2.3
4,486,408	+		MIT1002_03998	0.27	+1.0
4,486,408	+		MIT1002_03998	0.27	-0.6
4,486,413	+		MIT1002_03998	0.30	+0.9
4,486,416	-		MIT1002_03998	0.31	-1.1
4,486,416	-		MIT1002_03998	0.31	+3.1
4,486,416	-		MIT1002_03998	0.31	-2.0
4,486,421	-		MIT1002_03998	0.33	+0.9
4,486,426	-		MIT1002_03998	0.35	-0.9
4,486,438	+		MIT1002_03998	0.40	-0.8
4,486,440	-		MIT1002_03998	0.41	+0.9
4,486,448	+		MIT1002_03998	0.44	-3.1
4,486,448	+		MIT1002_03998	0.44	-0.3
4,486,448	+		MIT1002_03998	0.44	+3.1
4,486,456	-		MIT1002_03998	0.48	+0.4
4,486,456	-		MIT1002_03998	0.48	-1.1
4,486,456	-		MIT1002_03998	0.48	+0.2
4,486,456	-		MIT1002_03998	0.48	-1.1
4,486,456	-		MIT1002_03998	0.48	-0.1
4,486,456	-		MIT1002_03998	0.48	+1.7
4,486,465	+		MIT1002_03998	0.51	-0.5
4,486,648	+				+1.0
4,486,663	-				-0.6
4,486,675	-				-3.5
4,486,852	+		MIT1002_03999	0.22	+0.1
4,486,852	+		MIT1002_03999	0.22	+1.3
4,486,852	+		MIT1002_03999	0.22	-3.2
4,486,852	+		MIT1002_03999	0.22	-0.6
4,486,852	+		MIT1002_03999	0.22	+0.3
4,486,852	+		MIT1002_03999	0.22	+1.6
4,486,860	-		MIT1002_03999	0.22	+2.0
4,486,860	-		MIT1002_03999	0.22	+2.0
4,486,860	-		MIT1002_03999	0.22	+1.8
4,486,860	-		MIT1002_03999	0.22	+0.6
4,486,860	-		MIT1002_03999	0.22	+1.1
4,486,860	-		MIT1002_03999	0.22	-1.9
4,486,860	-		MIT1002_03999	0.22	+1.9
4,486,898	-		MIT1002_03999	0.26	+0.6
4,486,918	+		MIT1002_03999	0.28	+0.6
4,486,918	+		MIT1002_03999	0.28	-1.1
4,486,926	-		MIT1002_03999	0.29	-2.5
4,486,936	+		MIT1002_03999	0.30	+1.1
4,486,968	-		MIT1002_03999	0.33	+0.5
4,487,002	+		MIT1002_03999	0.36	-2.0
4,487,098	+		MIT1002_03999	0.45	-0.7
4,487,154	+		MIT1002_03999	0.51	+0.0
4,487,215	+		MIT1002_03999	0.57	+0.2
4,487,384	+		MIT1002_03999	0.73	-0.2
4,487,416	+		MIT1002_03999	0.76	+0.8
4,487,424	-		MIT1002_03999	0.77	-3.9
4,487,428	+		MIT1002_03999	0.77	+1.8
4,487,525	-		MIT1002_03999	0.87	-0.1
4,487,569	+				+2.0
4,487,569	+				-0.9
4,487,577	-				-3.1