Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03940

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
4,423,219	+		MIT1002_03939	0.57	-0.7
4,423,965	-				-3.2
4,423,982	+				+1.3
4,424,013	-				-0.1
4,424,015	+				+1.0
4,424,023	-				+0.7
4,424,024	-				-0.9
4,424,040	-				-0.0
4,424,061	+				+1.6
4,424,175	+				-0.4
4,424,336	+		MIT1002_03940	0.25	-0.2
4,424,342	-		MIT1002_03940	0.25	-1.9
4,424,476	+		MIT1002_03940	0.42	+1.5
4,424,492	+		MIT1002_03940	0.44	+0.4
4,424,589	+		MIT1002_03940	0.56	-0.2
4,424,736	-		MIT1002_03940	0.74	+1.5
4,424,773	+		MIT1002_03940	0.79	+1.3
4,424,892	+				-0.7
4,424,892	+				+0.5
4,424,892	+				-0.2
4,424,900	-				+0.3
4,424,900	-				+1.7
4,424,900	-				-0.6
4,424,900	-				-0.1
4,424,923	+				-0.6