Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03721

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
4,153,559	-		MIT1002_03720	0.31	+2.1
4,153,586	-		MIT1002_03720	0.33	-0.1
4,153,589	+		MIT1002_03720	0.33	+1.2
4,153,589	+		MIT1002_03720	0.33	+0.9
4,153,589	+		MIT1002_03720	0.33	-3.1
4,153,597	-		MIT1002_03720	0.34	+0.0
4,153,597	-		MIT1002_03720	0.34	+0.6
4,153,597	-		MIT1002_03720	0.34	-2.8
4,153,611	+		MIT1002_03720	0.35	-0.4
4,153,611	+		MIT1002_03720	0.35	-0.6
4,153,618	+		MIT1002_03720	0.36	+0.2
4,153,669	+		MIT1002_03720	0.39	+1.1
4,153,669	+		MIT1002_03720	0.39	+0.1
4,153,669	+		MIT1002_03720	0.39	-3.2
4,153,677	-		MIT1002_03720	0.40	-0.4
4,153,677	-		MIT1002_03720	0.40	+1.1
4,153,677	-		MIT1002_03720	0.40	-0.9
4,153,689	-		MIT1002_03720	0.41	-2.6
4,153,718	+		MIT1002_03720	0.43	-0.3
4,153,730	-		MIT1002_03720	0.44	-0.2
4,153,732	-		MIT1002_03720	0.44	-3.7
4,153,759	-		MIT1002_03720	0.46	-1.1
4,153,768	-		MIT1002_03720	0.46	+2.1
4,153,856	-		MIT1002_03720	0.53	+0.0
4,153,900	-		MIT1002_03720	0.56	+0.8
4,153,900	-		MIT1002_03720	0.56	+1.1
4,153,915	-		MIT1002_03720	0.57	+0.6
4,154,003	-		MIT1002_03720	0.64	-0.8
4,154,112	+		MIT1002_03720	0.71	-3.8
4,154,112	+		MIT1002_03720	0.71	+0.4
4,154,112	+		MIT1002_03720	0.71	-0.9
4,154,112	+		MIT1002_03720	0.71	-1.1
4,154,112	+		MIT1002_03720	0.71	+1.8
4,154,112	+		MIT1002_03720	0.71	+0.2
4,154,112	+		MIT1002_03720	0.71	+2.5
4,154,112	+		MIT1002_03720	0.71	-0.7
4,154,120	-		MIT1002_03720	0.72	-0.2
4,154,120	-		MIT1002_03720	0.72	+1.2
4,154,120	-		MIT1002_03720	0.72	-0.0
4,154,120	-		MIT1002_03720	0.72	-2.6
4,154,120	-		MIT1002_03720	0.72	-0.2
4,154,120	-		MIT1002_03720	0.72	+0.9
4,154,120	-		MIT1002_03720	0.72	-3.0
4,154,120	-		MIT1002_03720	0.72	+3.0
4,154,122	+		MIT1002_03720	0.72	-2.8
4,154,122	+		MIT1002_03720	0.72	-3.7
4,154,130	-		MIT1002_03720	0.73	+0.1
4,154,201	+		MIT1002_03720	0.78	+0.3
4,154,235	-		MIT1002_03720	0.80	+0.9
4,154,261	+		MIT1002_03720	0.82	+0.6
4,154,284	-		MIT1002_03720	0.84	-0.2
4,154,284	-		MIT1002_03720	0.84	-0.3
4,154,384	+				-4.1
4,154,412	+				-1.3
4,154,415	-				-3.1
4,154,429	+				+0.8
4,154,429	+				+2.6
4,154,455	+				-3.6
4,154,455	+				-0.4
4,154,475	-				+0.7
4,154,514	+				-0.9
4,154,514	+				-0.1
4,154,514	+				-1.6
4,154,514	+				-5.0
4,154,514	+				-3.0
4,154,514	+				+0.6
4,154,514	+				-0.8
4,154,514	+				-1.6
4,154,522	-				-2.5
4,154,522	-				-2.0
4,154,522	-				-0.1
4,154,532	-				+0.9
4,154,579	+		MIT1002_03721	0.10	-0.9
4,154,655	+		MIT1002_03721	0.20	-3.0
4,154,708	+		MIT1002_03721	0.27	+1.0
4,154,792	+		MIT1002_03721	0.37	-0.7
4,154,822	-		MIT1002_03721	0.41	+2.2
4,154,832	-		MIT1002_03721	0.43	-1.8
4,154,902	+		MIT1002_03721	0.52	+1.2
4,154,910	-		MIT1002_03721	0.53	-2.6
4,154,910	-		MIT1002_03721	0.53	-0.7
4,154,929	-		MIT1002_03721	0.55	+3.3
4,154,936	-		MIT1002_03721	0.56	-0.1
4,154,946	-		MIT1002_03721	0.57	+0.6
4,154,949	+		MIT1002_03721	0.58	-0.3
4,154,955	-		MIT1002_03721	0.58	+1.1
4,154,957	-		MIT1002_03721	0.59	+1.4
4,154,960	-		MIT1002_03721	0.59	+0.0
4,154,962	-		MIT1002_03721	0.59	+1.7
4,155,035	-		MIT1002_03721	0.69	+0.4
4,155,069	+		MIT1002_03721	0.73	-0.3
4,155,069	+		MIT1002_03721	0.73	+0.7
4,155,077	-		MIT1002_03721	0.74	+0.6
4,155,077	-		MIT1002_03721	0.74	-0.9
4,155,085	-		MIT1002_03721	0.75	+2.3
4,155,231	+				+1.3
4,155,394	-				-0.2
4,155,407	-				-0.0
4,155,413	+				-2.7
4,155,440	-				-1.4
4,155,452	-				-2.5
4,155,454	+				-0.7
4,155,470	-				-0.7
4,155,477	-				-3.1
4,155,518	+				-1.8
4,155,540	+				-0.7
4,155,557	+				-3.0
4,155,557	+				-3.5
4,155,565	-				-2.1
4,155,582	-				-1.6
4,155,583	+				-4.1
4,155,598	+				+1.7
4,155,630	+		MIT1002_03722	0.11	+0.2
4,155,630	+		MIT1002_03722	0.11	-2.0
4,155,649	+		MIT1002_03722	0.12	+0.1
4,155,704	-		MIT1002_03722	0.14	-0.0
4,155,760	+		MIT1002_03722	0.17	-0.5
4,155,803	+		MIT1002_03722	0.18	-3.4
4,155,808	-		MIT1002_03722	0.19	-0.0
4,155,835	+		MIT1002_03722	0.20	-1.1
4,155,852	-		MIT1002_03722	0.21	+2.5
4,155,867	+		MIT1002_03722	0.21	+2.4
4,155,907	-		MIT1002_03722	0.23	-0.4
4,155,913	+		MIT1002_03722	0.23	+0.7
4,156,036	+		MIT1002_03722	0.29	-0.8
4,156,044	-		MIT1002_03722	0.29	+1.8
4,156,072	+		MIT1002_03722	0.30	+0.7
4,156,109	+		MIT1002_03722	0.32	-0.9
4,156,119	+		MIT1002_03722	0.32	-1.3
4,156,119	+		MIT1002_03722	0.32	-0.6
4,156,171	-		MIT1002_03722	0.35	+1.8
4,156,171	-		MIT1002_03722	0.35	+2.1
4,156,171	-		MIT1002_03722	0.35	-2.3
4,156,228	+		MIT1002_03722	0.37	-0.9
4,156,264	+		MIT1002_03722	0.39	+0.9