Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03529

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
3,947,863	-				+0.3
3,947,872	-				+2.1
3,947,984	-				-0.8
3,948,144	+				+2.3
3,948,152	-				-0.1
3,948,222	+		MIT1002_03528	0.14	+1.1
3,948,230	-		MIT1002_03528	0.15	-0.5
3,948,230	-		MIT1002_03528	0.15	+0.3
3,948,232	-		MIT1002_03528	0.16	-0.1
3,948,285	+		MIT1002_03528	0.25	-3.0
3,948,327	-		MIT1002_03528	0.33	+1.3
3,948,328	+		MIT1002_03528	0.33	+0.1
3,948,333	+		MIT1002_03528	0.34	+0.0
3,948,341	-		MIT1002_03528	0.36	-0.4
3,948,534	+		MIT1002_03528	0.71	-0.0
3,948,559	-		MIT1002_03528	0.76	+0.6
3,948,579	+		MIT1002_03528	0.80	+0.6
3,948,603	+		MIT1002_03528	0.84	+0.7
3,948,722	+				+1.5
3,948,722	+				+0.6
3,948,769	-				-3.3
3,948,879	-		MIT1002_03529	0.13	-3.6
3,948,893	+		MIT1002_03529	0.15	-1.9
3,948,906	-		MIT1002_03529	0.17	+0.9
3,948,906	-		MIT1002_03529	0.17	+0.8
3,948,920	-		MIT1002_03529	0.20	-0.7
3,948,995	+		MIT1002_03529	0.32	+0.2
3,949,030	+		MIT1002_03529	0.38	+1.1
3,949,035	+		MIT1002_03529	0.38	-0.5
3,949,035	+		MIT1002_03529	0.38	-0.4
3,949,144	-		MIT1002_03529	0.56	+0.3
3,949,170	+		MIT1002_03529	0.60	+0.2
3,949,199	+		MIT1002_03529	0.65	+1.4
3,949,207	-		MIT1002_03529	0.66	+0.2
3,949,222	-		MIT1002_03529	0.69	+0.7
3,949,312	+		MIT1002_03529	0.83	+1.4
3,949,320	-		MIT1002_03529	0.84	-1.0
3,949,320	-		MIT1002_03529	0.84	+1.5
3,949,372	+				-0.5
3,949,382	+				+1.8
3,949,422	+				-0.9
3,949,458	-				+0.7
3,949,531	-				-3.6
3,949,649	-				-1.8
3,949,694	+				-3.3
3,949,702	+				-0.1
3,949,722	+				-0.7
3,949,884	+		MIT1002_03530	0.20	-1.7
3,949,891	-		MIT1002_03530	0.20	-1.1
3,949,937	+		MIT1002_03530	0.23	+0.5
3,950,060	+		MIT1002_03530	0.31	-0.2
3,950,068	-		MIT1002_03530	0.31	+0.4
3,950,092	-		MIT1002_03530	0.33	+1.4
3,950,100	+		MIT1002_03530	0.33	-0.8
3,950,143	-		MIT1002_03530	0.36	+2.3
3,950,162	+		MIT1002_03530	0.37	+0.7
3,950,212	-		MIT1002_03530	0.40	-3.3
3,950,320	-		MIT1002_03530	0.47	+1.0
3,950,355	-		MIT1002_03530	0.49	+1.2
3,950,386	+		MIT1002_03530	0.51	+2.4