Strain Fitness in Alteromonas macleodii MIT1002 around MIT1002_03202

Experiment: Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Mixed culture with Prochlorococcus marinus str. MED4; Experiment B, time point 3
3,569,843	-		MIT1002_03201	0.60	+0.4
3,569,883	-		MIT1002_03201	0.62	+1.9
3,569,897	+		MIT1002_03201	0.63	+0.9
3,569,897	+		MIT1002_03201	0.63	+0.6
3,569,915	-		MIT1002_03201	0.64	-0.1
3,569,918	+		MIT1002_03201	0.64	+0.9
3,569,920	-		MIT1002_03201	0.64	-2.2
3,569,986	+		MIT1002_03201	0.67	-0.0
3,569,998	+		MIT1002_03201	0.68	-0.6
3,570,021	-		MIT1002_03201	0.69	-0.2
3,570,082	-		MIT1002_03201	0.72	-0.2
3,570,094	+		MIT1002_03201	0.72	-0.9
3,570,094	+		MIT1002_03201	0.72	-0.3
3,570,102	-		MIT1002_03201	0.73	-0.1
3,570,111	+		MIT1002_03201	0.73	-2.6
3,570,111	+		MIT1002_03201	0.73	+0.4
3,570,121	+		MIT1002_03201	0.74	+0.1
3,570,129	-		MIT1002_03201	0.74	+0.9
3,570,143	+		MIT1002_03201	0.75	+0.2
3,570,192	-		MIT1002_03201	0.77	-0.3
3,570,199	+		MIT1002_03201	0.77	-0.6
3,570,207	-		MIT1002_03201	0.78	-2.2
3,570,207	-		MIT1002_03201	0.78	-1.0
3,570,221	-		MIT1002_03201	0.79	+1.5
3,570,229	+		MIT1002_03201	0.79	-1.4
3,570,248	+		MIT1002_03201	0.80	+0.4
3,570,256	-		MIT1002_03201	0.80	+2.1
3,570,268	+		MIT1002_03201	0.81	+0.7
3,570,337	+		MIT1002_03201	0.84	-3.6
3,570,340	-		MIT1002_03201	0.84	-2.6
3,570,340	-		MIT1002_03201	0.84	-0.7
3,570,342	+		MIT1002_03201	0.84	-2.2
3,570,345	-		MIT1002_03201	0.85	-0.0
3,570,345	-		MIT1002_03201	0.85	+1.4
3,570,345	-		MIT1002_03201	0.85	+1.4
3,570,345	-		MIT1002_03201	0.85	+1.2
3,570,345	-		MIT1002_03201	0.85	+0.7
3,570,345	-		MIT1002_03201	0.85	-0.0
3,570,350	-		MIT1002_03201	0.85	+0.3
3,570,382	+		MIT1002_03201	0.86	-1.8
3,570,388	-		MIT1002_03201	0.87	+1.6
3,570,388	-		MIT1002_03201	0.87	+2.0
3,570,411	-		MIT1002_03201	0.88	-0.0
3,570,420	+		MIT1002_03201	0.88	+0.4
3,570,426	-		MIT1002_03201	0.89	-1.0
3,570,428	-		MIT1002_03201	0.89	+0.2
3,570,505	+				-0.1
3,570,513	-				-1.1
3,570,522	+				-0.5
3,570,522	+				-3.5
3,570,522	+				-2.4
3,570,522	+				-0.7
3,570,530	-				+0.0
3,570,530	-				-1.4
3,570,535	-				-0.3
3,570,562	+				+1.4
3,570,562	+				-2.7
3,570,570	-				+1.8
3,570,570	-				+0.1
3,570,579	+				+0.1
3,570,580	-				+1.1
3,570,843	+				+0.3
3,570,851	-				-0.5
3,570,872	+		MIT1002_03202	0.11	+0.1
3,570,906	+		MIT1002_03202	0.17	+1.3
3,570,906	+		MIT1002_03202	0.17	-2.0
3,570,906	+		MIT1002_03202	0.17	+0.0
3,570,906	+		MIT1002_03202	0.17	-0.2
3,570,906	+		MIT1002_03202	0.17	-0.4
3,570,906	+		MIT1002_03202	0.17	-1.8
3,570,906	+		MIT1002_03202	0.17	-0.1
3,570,906	+		MIT1002_03202	0.17	-1.7
3,570,906	+		MIT1002_03202	0.17	+0.9
3,570,906	+		MIT1002_03202	0.17	-2.4
3,570,906	+		MIT1002_03202	0.17	-2.8
3,570,907	-		MIT1002_03202	0.17	-1.2
3,570,914	-		MIT1002_03202	0.19	+1.5
3,570,914	-		MIT1002_03202	0.19	-1.1
3,570,914	-		MIT1002_03202	0.19	-0.2
3,570,914	-		MIT1002_03202	0.19	+1.5
3,570,914	-		MIT1002_03202	0.19	+0.1
3,570,914	-		MIT1002_03202	0.19	-1.6
3,570,919	+		MIT1002_03202	0.20	+0.9
3,570,919	+		MIT1002_03202	0.20	-0.5
3,570,920	+		MIT1002_03202	0.20	-0.0
3,570,927	-		MIT1002_03202	0.21	-0.1
3,570,938	+		MIT1002_03202	0.23	-0.0
3,571,019	+		MIT1002_03202	0.38	-0.8
3,571,038	+		MIT1002_03202	0.42	+2.1
3,571,043	+		MIT1002_03202	0.43	+0.7
3,571,043	+		MIT1002_03202	0.43	+0.6
3,571,046	-		MIT1002_03202	0.43	+0.2
3,571,152	+		MIT1002_03202	0.63	+0.8
3,571,217	-		MIT1002_03202	0.75	-0.1
3,571,217	-		MIT1002_03202	0.75	-0.1
3,571,265	-		MIT1002_03202	0.84	+3.5
3,571,267	+		MIT1002_03202	0.85	-0.5
3,571,281	+		MIT1002_03202	0.87	+1.0
3,571,448	+		MIT1002_03203	0.14	+0.4
3,571,490	-		MIT1002_03203	0.20	+1.9
3,571,519	+		MIT1002_03203	0.24	+1.0
3,571,537	+		MIT1002_03203	0.26	+0.6
3,571,539	+		MIT1002_03203	0.26	+0.1
3,571,555	+		MIT1002_03203	0.29	-2.3
3,571,682	-		MIT1002_03203	0.46	+0.1
3,571,690	-		MIT1002_03203	0.47	-0.4
3,571,709	-		MIT1002_03203	0.49	-1.8
3,571,709	-		MIT1002_03203	0.49	+0.0
3,571,747	+		MIT1002_03203	0.55	+0.9
3,571,747	+		MIT1002_03203	0.55	-2.2
3,571,747	+		MIT1002_03203	0.55	-2.2
3,571,747	+		MIT1002_03203	0.55	-1.6
3,571,747	+		MIT1002_03203	0.55	-0.1
3,571,755	-		MIT1002_03203	0.56	-1.2
3,571,755	-		MIT1002_03203	0.56	-3.3
3,571,755	-		MIT1002_03203	0.56	-4.0
3,571,755	-		MIT1002_03203	0.56	-3.0
3,571,755	-		MIT1002_03203	0.56	-0.3
3,571,809	+		MIT1002_03203	0.63	-0.5
3,571,831	+		MIT1002_03203	0.66	-0.2
3,571,831	+		MIT1002_03203	0.66	+0.1
3,572,049	+				-4.2
3,572,049	+				-2.1
3,572,059	-				+1.8
3,572,059	-				-1.4
3,572,101	+				+1.7
3,572,194	-				+0.5